Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475930

Identifier: 113475930

GI number: 113475930

Start: 3565074

End: 3565556

Strand: Direct

Name: 113475930

Synonym: Tery_2294

Alternate gene names: NA

Gene position: 3565074-3565556 (Clockwise)

Preceding gene: 113475929

Following gene: 113475931

Centisome position: 46.0

GC content: 34.99

Gene sequence:

>483_bases
ATGCCAATTCCACTATTTATGTGGGCTATAGCAGGTGCTTTAGGGGTTTCAGCAACTTTCGCATTAATATTTTGGGATCA
AATTTTAGGCTGGGCAGAAGATAGTCTTTTTCCTTGGATTAAAAATAATATTCCTTCAATTGAAAGTGCAGTAAGAAAAG
CATTTAGTGCTTTAGATAATCAAGCTGTTGATACCCGTAAGATCATTCGCAAAGCCTGGAAAAAGTTGCGTAAATTTTTG
TTAAAGCAAGTAGTAACACTAGAAAGAAAGTCATCAAACAAATGGATAAGAAGAGTTACATCTTGGGTAATTAAAGTTCT
CGAGTCTGGTGAAAAAGTTCCTGTAAAAGTAGAGACAGAAGAGAAAGTTAATTGGGATGAATTACCTGAAGATGTGCGTA
AAGAATTTCTCAGCAAAGGAAAAAGTGAAAGTGAAATTGATGTAACAAAAAATCGCGATGACGAAATGGATATGTCTGCT
TAG

Upstream 100 bases:

>100_bases
GAATTAGATAGAGATAGTTTACCTGAAGATGTACGTTCAGAGTGGTTACGCGAGGGTGAAAAAAAATTAACTTTTAAACT
TTATCCAAAGGAGTAAAATT

Downstream 100 bases:

>100_bases
TTAACTAGTATGTTTTGCTCAAAAAAATTAAGTATTTAGGGTAAAAAAAAATGAATCAAATCAAAATTGACTGGCTTGCC
ATTTCTATTATTGCAGTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MPIPLFMWAIAGALGVSATFALIFWDQILGWAEDSLFPWIKNNIPSIESAVRKAFSALDNQAVDTRKIIRKAWKKLRKFL
LKQVVTLERKSSNKWIRRVTSWVIKVLESGEKVPVKVETEEKVNWDELPEDVRKEFLSKGKSESEIDVTKNRDDEMDMSA

Sequences:

>Translated_160_residues
MPIPLFMWAIAGALGVSATFALIFWDQILGWAEDSLFPWIKNNIPSIESAVRKAFSALDNQAVDTRKIIRKAWKKLRKFL
LKQVVTLERKSSNKWIRRVTSWVIKVLESGEKVPVKVETEEKVNWDELPEDVRKEFLSKGKSESEIDVTKNRDDEMDMSA
>Mature_159_residues
PIPLFMWAIAGALGVSATFALIFWDQILGWAEDSLFPWIKNNIPSIESAVRKAFSALDNQAVDTRKIIRKAWKKLRKFLL
KQVVTLERKSSNKWIRRVTSWVIKVLESGEKVPVKVETEEKVNWDELPEDVRKEFLSKGKSESEIDVTKNRDDEMDMSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18480; Mature: 18348

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPLFMWAIAGALGVSATFALIFWDQILGWAEDSLFPWIKNNIPSIESAVRKAFSALDN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCC
QAVDTRKIIRKAWKKLRKFLLKQVVTLERKSSNKWIRRVTSWVIKVLESGEKVPVKVETE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
EKVNWDELPEDVRKEFLSKGKSESEIDVTKNRDDEMDMSA
CCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIPLFMWAIAGALGVSATFALIFWDQILGWAEDSLFPWIKNNIPSIESAVRKAFSALDN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHCC
QAVDTRKIIRKAWKKLRKFLLKQVVTLERKSSNKWIRRVTSWVIKVLESGEKVPVKVETE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
EKVNWDELPEDVRKEFLSKGKSESEIDVTKNRDDEMDMSA
CCCCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA