Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475929

Identifier: 113475929

GI number: 113475929

Start: 3564500

End: 3565069

Strand: Direct

Name: 113475929

Synonym: Tery_2293

Alternate gene names: NA

Gene position: 3564500-3565069 (Clockwise)

Preceding gene: 113475927

Following gene: 113475930

Centisome position: 45.99

GC content: 29.12

Gene sequence:

>570_bases
ATGAAAGAAAGGGAATTATCTCGCTTATTAAAAAAACCATTCTATACAGTTATAAAGTATCTACACCAAAAAGATTTACC
AAAAGAAGTAAAAAATGCTTTGAACGATATTTTTAATGTTTTAGAAATTGAACCAGACAATGATATTTCTAACAGACAGG
AAGTTTATCAAAGCATTGCCAAATTTCTGCAAAAAAACTTGCCTCAACCAAGATCTGAACCTTTAAGAATTACCCAATGT
TTAAGAATTACCTATAAACTTTGTAGAGAGTTTGACGAACAATTAGTAAAAGAAGGATCAGAAATTAACCCGACACTTCT
CGAAGCCGCAAAAGCATTAATTTTAACTATTAAAGTAAATTATGAACCTAAAGTAAATTATGAACCTGAATTACTCAAAG
TTCAAACTTATAATCGTCAAATAGAAATTTATTACATTAAAGAAAACAAACCAATAGTAACAAGAATAGAACAGGAATTA
GATAGAGATAGTTTACCTGAAGATGTACGTTCAGAGTGGTTACGCGAGGGTGAAAAAAAATTAACTTTTAAACTTTATCC
AAAGGAGTAA

Upstream 100 bases:

>100_bases
TCATTAAATTCCCTACTTATGCCGACTATTCCCTACTGACAATAGAAAAAAAATGTGATGCAATAGAAGGATAGTAAAAA
TTAAGTCACTAGGTTGATTT

Downstream 100 bases:

>100_bases
AATTATGCCAATTCCACTATTTATGTGGGCTATAGCAGGTGCTTTAGGGGTTTCAGCAACTTTCGCATTAATATTTTGGG
ATCAAATTTTAGGCTGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC
LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL
DRDSLPEDVRSEWLREGEKKLTFKLYPKE

Sequences:

>Translated_189_residues
MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC
LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL
DRDSLPEDVRSEWLREGEKKLTFKLYPKE
>Mature_189_residues
MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIAKFLQKNLPQPRSEPLRITQC
LRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVNYEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQEL
DRDSLPEDVRSEWLREGEKKLTFKLYPKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22626; Mature: 22626

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KFLQKNLPQPRSEPLRITQCLRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEC
YEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQELDRDSLPEDVRSEWLREGEKK
CCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCE
LTFKLYPKE
EEEEECCCC
>Mature Secondary Structure
MKERELSRLLKKPFYTVIKYLHQKDLPKEVKNALNDIFNVLEIEPDNDISNRQEVYQSIA
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KFLQKNLPQPRSEPLRITQCLRITYKLCREFDEQLVKEGSEINPTLLEAAKALILTIKVN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEEC
YEPKVNYEPELLKVQTYNRQIEIYYIKENKPIVTRIEQELDRDSLPEDVRSEWLREGEKK
CCCCCCCCCCEEEEEECCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCE
LTFKLYPKE
EEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA