| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475927
Identifier: 113475927
GI number: 113475927
Start: 3561187
End: 3561351
Strand: Direct
Name: 113475927
Synonym: Tery_2290
Alternate gene names: NA
Gene position: 3561187-3561351 (Clockwise)
Preceding gene: 113475926
Following gene: 113475929
Centisome position: 45.95
GC content: 35.15
Gene sequence:
>165_bases ATGACTGCTTTGGGTATTAATCTAAGTTTATTTGAGTCAGTTAAAGAAGTTCCTGTGGCAATGAACCAAATGCACGGCGG ATACTGGTTATTAGAAATAATTAAATTGGTTATTGGTGCTACTTTATTCGGTTGGTGTTACCGACAACCAACAAAGATAG ATTAA
Upstream 100 bases:
>100_bases AAAGGCTAGTAATTTTATTAAAAAGAGTAAAACAGCAATTATTTTTTCTATAATATTATTAGGAATAGTTCTAATTGATA CCTACGGTTTAACTCCTCAA
Downstream 100 bases:
>100_bases TAATTATTTTTACCGTGCTAGAAAATAGTCAAAAAAATTAGGGTGAGTAAATTTTATTTGAGATCTAATTATCTCAATTA GTAAATATTTACTCACCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MTALGINLSLFESVKEVPVAMNQMHGGYWLLEIIKLVIGATLFGWCYRQPTKID
Sequences:
>Translated_54_residues MTALGINLSLFESVKEVPVAMNQMHGGYWLLEIIKLVIGATLFGWCYRQPTKID >Mature_53_residues TALGINLSLFESVKEVPVAMNQMHGGYWLLEIIKLVIGATLFGWCYRQPTKID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6097; Mature: 5966
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTALGINLSLFESVKEVPVAMNQMHGGYWLLEIIKLVIGATLFGWCYRQPTKID CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TALGINLSLFESVKEVPVAMNQMHGGYWLLEIIKLVIGATLFGWCYRQPTKID CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA