Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475905

Identifier: 113475905

GI number: 113475905

Start: 3523142

End: 3524452

Strand: Direct

Name: 113475905

Synonym: Tery_2265

Alternate gene names: NA

Gene position: 3523142-3524452 (Clockwise)

Preceding gene: 113475904

Following gene: 113475915

Centisome position: 45.46

GC content: 40.58

Gene sequence:

>1311_bases
ATGACTCAATCAACTTCTTACTCTGAAATTACTAAATGCCGAGTTTGTGGCTCCGAAAAACTTACTCCAGTTTTAAGTTT
GGGCAGCCAACCTCTCAGTGGAATTTATCCGTCCCCTGACTCTCCAGATCCATCTACTTCTCCTTTAGATTTAGTAATTT
GTGATAGTGAGGAAGGCTGTCGAACGTTGCAACTAAAACACAGTGCAGATGCATGGGAAATGTATGGTGATAACTATGGT
TTTCTCTCCGCAACAAGTCCAACAATGTGCCGTCACTTACAAGGTATTGTTACAGAAGCTTTGGAACTGGTACAACCCAA
TCCTGGGGATGTGGTTTTAGACATCGCTTGCAATGATGGTACTTTACTGAACTTTTATCGCGATCGTAACCTAACTCGCA
TAGGCATGGATCCATCAAGTAAAAAATCTGCAGATAAATTTGATGCAGACATTCAAGTTATCTATGATTTCTTTTCTGCT
GATGGAGTACGGGAAATGGTGGGGGATAAGAAATGTAAAATCATTACTTCCATTGCCATGTTTTATGACCTGGAAGATCC
AATAGACTTTATGAAGCAAATTCATTCTGTTTTAGCTCCAGATGGGATTTGGGTTTTTGAACTTTCCTATATGCCCCTGA
TGTTGAAAAATCTGACCTACGGCCAGATTATGCACGAACATTTAACTTACCTGGGTTTGCAGCAAATTCAATGGATGGCA
GAACGCGCTGACCTTAAAATACTCGATGTCAGTTTGAATTTTATGCATGGTGGTAGTTTTCGGATTAAAGCTGCCCGCAA
GGAGAATCCGATGAAGCCTAACCATGAGGCGATCGAGAAAATTCTTGATGCCGAAAAGCCCCTGGCAACAATGGCTCCTT
TCGAGCGATTCCACAATCGGATTATTCAACATCGGCATGAGATACGAGCATTTTTTGATCTGATGCGATCTTCTGGTAAA
AAAGTCTATGGCTATGGAGCTTCGACTAAGGGGAATATTGTTTTGAATTATTGTGGCATTACCCCACAAGATTTGATAGC
TATTAGCGACCTGGAACCTCAAAAAGATGGTGCGGTTACGCCAGGAACTCGGATTCCAATTATAAGTCACGAAAAGCTAC
GAGAAATCCATCCTGATTATGCTCTGGTGTTGGCTTGGCATTATCGTCCAGAAATCATTAATAGTGAGATTAACTACTTG
GAAAAAGGTGGGAAATTGGTATTTGATTTACCGCGTCCCCATACTGTTAATTTGGAAAATTATCAGTATTATTTGAATGC
TTCCTTTGAAGACCTAGCTTTTTCTTTATAG

Upstream 100 bases:

>100_bases
AGAACCACTATATCTAGTAGGGGTCAACTGCCTTTAACCCCTACAGATGGTGTATATTTTCATATTTTGCGTAAGTCCTG
CATATTATCGAAAAAAATAA

Downstream 100 bases:

>100_bases
ATTAAAGAATTGCTGCTGTTTTATGTTGGCCCGTAGAACAGACATCTTGTCTGTTCTGTGTAGGTTTTCATTGCCCTTTA
AGTATTGCGGTAATTACTCT

Product: C-methyltransferase

Products: NA

Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; D-Mycarose 3-C-Methyltransferase; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; NDP-Hexose Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYG
FLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSA
DGVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA
ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGK
KVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYL
EKGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL

Sequences:

>Translated_436_residues
MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYG
FLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSA
DGVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA
ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGK
KVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYL
EKGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL
>Mature_435_residues
TQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGCRTLQLKHSADAWEMYGDNYGF
LSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDGTLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSAD
GVREMVGDKKCKIITSIAMFYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMAE
RADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNRIIQHRHEIRAFFDLMRSSGKK
VYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVTPGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLE
KGGKLVFDLPRPHTVNLENYQYYLNASFEDLAFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49284; Mature: 49153

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGC
CCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RTLQLKHSADAWEMYGDNYGFLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDG
EEEEEECCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
TLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSADGVREMVGDKKCKIITSIAM
EEEEEEECCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH
FYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA
HHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNR
HHCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IIQHRHEIRAFFDLMRSSGKKVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHEEEEECCCCCCCCCCC
PGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLEKGGKLVFDLPRPHTVNLEN
CCCCCCEECHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEECCCC
YQYYLNASFEDLAFSL
EEEEEECCHHHHHCCC
>Mature Secondary Structure 
TQSTSYSEITKCRVCGSEKLTPVLSLGSQPLSGIYPSPDSPDPSTSPLDLVICDSEEGC
CCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
RTLQLKHSADAWEMYGDNYGFLSATSPTMCRHLQGIVTEALELVQPNPGDVVLDIACNDG
EEEEEECCCCHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
TLLNFYRDRNLTRIGMDPSSKKSADKFDADIQVIYDFFSADGVREMVGDKKCKIITSIAM
EEEEEEECCCEEEECCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH
FYDLEDPIDFMKQIHSVLAPDGIWVFELSYMPLMLKNLTYGQIMHEHLTYLGLQQIQWMA
HHCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
ERADLKILDVSLNFMHGGSFRIKAARKENPMKPNHEAIEKILDAEKPLATMAPFERFHNR
HHCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
IIQHRHEIRAFFDLMRSSGKKVYGYGASTKGNIVLNYCGITPQDLIAISDLEPQKDGAVT
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCHHHEEEEECCCCCCCCCCC
PGTRIPIISHEKLREIHPDYALVLAWHYRPEIINSEINYLEKGGKLVFDLPRPHTVNLEN
CCCCCCEECHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCEECCCC
YQYYLNASFEDLAFSL
EEEEEECCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA