| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475892
Identifier: 113475892
GI number: 113475892
Start: 3501150
End: 3501677
Strand: Direct
Name: 113475892
Synonym: Tery_2251
Alternate gene names: NA
Gene position: 3501150-3501677 (Clockwise)
Preceding gene: 113475890
Following gene: 113475895
Centisome position: 45.18
GC content: 35.04
Gene sequence:
>528_bases ATGAAAATTTTGGATTCTCAAGGACGATTATTTGGTAAAATCAGTATCTTAGACCTTGGTGCCGTGTTAATAATTTTTAT GGTATTGGTGGGAATATTTGTCTTTCCTGGTACTAACAAAAATTCTGTTGCTCAAGTGGGCAATGTTATTACGAAACCAG TTGAAGTAGATGCTATTGCTTTAGGTTTAAAAGGTCGTTACCCTGAAAAATTATTAAAGGAGGGGGAAAAAACTCAATTA ATTATCCGGAACCAACCTTATGGAGAAGTCGACCTAAAATCTGTAGAGTTTTTGACTCGAAAAGTGGCAGTTCCTCAACC GGATGGAACGGTAAGAGCTTTACCAGATCCTAGAGATAAAGAACTATTTAGTAGAAATGTTTTACTAACATTAAAAGGTC AAGGCAGAGTTACTAATGATGGTCCTGTTTTAGGAAATATTAAGGTAAAAATTGGGATGACAATTGAGCTAGAAGGTAGG GACTATAATTTTAATGCTAGTGTAATTGATGTACGAGTACAAGAGTAA
Upstream 100 bases:
>100_bases TAGTATATGGGATATGTTGGAAGACTATAAAAAGCTCACTTGATAATTGGGCTATTTAATGTTGAGCAGTTTACTTTTGT AAAAATTAAGTTATAAAGTT
Downstream 100 bases:
>100_bases TTTATACTATTTCTCTGTAATAACTTGCTTAATAATTGTTGCTTATATCTTATTTACACTGACTATTTTTAATCTTGAGA TATTATACAAAGTGTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKILDSQGRLFGKISILDLGAVLIIFMVLVGIFVFPGTNKNSVAQVGNVITKPVEVDAIALGLKGRYPEKLLKEGEKTQL IIRNQPYGEVDLKSVEFLTRKVAVPQPDGTVRALPDPRDKELFSRNVLLTLKGQGRVTNDGPVLGNIKVKIGMTIELEGR DYNFNASVIDVRVQE
Sequences:
>Translated_175_residues MKILDSQGRLFGKISILDLGAVLIIFMVLVGIFVFPGTNKNSVAQVGNVITKPVEVDAIALGLKGRYPEKLLKEGEKTQL IIRNQPYGEVDLKSVEFLTRKVAVPQPDGTVRALPDPRDKELFSRNVLLTLKGQGRVTNDGPVLGNIKVKIGMTIELEGR DYNFNASVIDVRVQE >Mature_175_residues MKILDSQGRLFGKISILDLGAVLIIFMVLVGIFVFPGTNKNSVAQVGNVITKPVEVDAIALGLKGRYPEKLLKEGEKTQL IIRNQPYGEVDLKSVEFLTRKVAVPQPDGTVRALPDPRDKELFSRNVLLTLKGQGRVTNDGPVLGNIKVKIGMTIELEGR DYNFNASVIDVRVQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19256; Mature: 19256
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILDSQGRLFGKISILDLGAVLIIFMVLVGIFVFPGTNKNSVAQVGNVITKPVEVDAIA CCEECCCCCEEEEEEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCEEEEEEE LGLKGRYPEKLLKEGEKTQLIIRNQPYGEVDLKSVEFLTRKVAVPQPDGTVRALPDPRDK EECCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCH ELFSRNVLLTLKGQGRVTNDGPVLGNIKVKIGMTIELEGRDYNFNASVIDVRVQE HHHCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure MKILDSQGRLFGKISILDLGAVLIIFMVLVGIFVFPGTNKNSVAQVGNVITKPVEVDAIA CCEECCCCCEEEEEEEEHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCEEEEEEE LGLKGRYPEKLLKEGEKTQLIIRNQPYGEVDLKSVEFLTRKVAVPQPDGTVRALPDPRDK EECCCCCHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCH ELFSRNVLLTLKGQGRVTNDGPVLGNIKVKIGMTIELEGRDYNFNASVIDVRVQE HHHCCCEEEEECCCCEECCCCCEEEEEEEEEEEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA