Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475852

Identifier: 113475852

GI number: 113475852

Start: 3446592

End: 3447344

Strand: Direct

Name: 113475852

Synonym: Tery_2211

Alternate gene names: NA

Gene position: 3446592-3447344 (Clockwise)

Preceding gene: 113475851

Following gene: 113475853

Centisome position: 44.47

GC content: 37.32

Gene sequence:

>753_bases
ATGAGTGTGATAGTGATAGGCGATCGCGCCGTGGGCAAAACTCACATGGGATTGGCCTTGGCCCAGCCAATTGGTGAATG
GCGGGTTAAGATCATAGACCCATCTTATAAGACGCTGAGAGAAAAACTTCAAAAAGTAGATACTGGTGATATGGTTCCAA
CTAGAGACATGATAAGAAGACCAGTCAGGCTAGAAGTTCAGTTAAATCACCGCAAAATTATAGAATCAGTTTGGGTAGAT
ACTTCTGGGGAAATCTGGGAAACTGAATGGCAGGAAAAAAATGAAGATGATTGGAATGACTTTAAGGAAAAAATCGGTCA
AAATATAGGCATCATTTTGTTATTACCTCCCTATAAAGAAATAGTGCTCAATCATTTGCTCAAGAAGGCATCCTCAGGTA
TGACTTTAGATCCAGACCAATTAATGAATGCTCAAGGGTGGTCTAATAATTTAGAAGATTGGTTAAGGTTTTTCAATCAA
TATTGTAGTCGAGTAGATAACATTGCTATTTGCCTACATAAAGCTGATTTATTCTGTGAAAGTCTTGACGATGAAGCAAT
AAAAATGCAGGGACATCCCGTCGAGCGTCAAAAACAAGTACGCAATAGATATTTTGCTGTTGCTAAAGAAGTAATAAACA
GAAATAACCGAGAGGTAAGGCCTTTTCAGTTTTTTATTACTAGTATTAGCAATTGTACTTTATTAGAAGCACCCTGGCTT
TATTTAAGTCCTTTTATTCTCCATTATCGTTAA

Upstream 100 bases:

>100_bases
AAGTATTTTTTATGAGTAAAGTTATTGTGATAGGCGATCGCCAAGTTGGTCAAACAAATATTCTTCAAAGTTTGGCCCAA
ATTTATGATAGGAGGTGGGA

Downstream 100 bases:

>100_bases
AAGTATGACTCAGATTAGTATTATTGGTACTAGAGCTTGTGGCAAGACAACCTAAGTTTAGGAGCTGCTCCTAACTATGC
AGTAGCTTTACGAGCAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSVIVIGDRAVGKTHMGLALAQPIGEWRVKIIDPSYKTLREKLQKVDTGDMVPTRDMIRRPVRLEVQLNHRKIIESVWVD
TSGEIWETEWQEKNEDDWNDFKEKIGQNIGIILLLPPYKEIVLNHLLKKASSGMTLDPDQLMNAQGWSNNLEDWLRFFNQ
YCSRVDNIAICLHKADLFCESLDDEAIKMQGHPVERQKQVRNRYFAVAKEVINRNNREVRPFQFFITSISNCTLLEAPWL
YLSPFILHYR

Sequences:

>Translated_250_residues
MSVIVIGDRAVGKTHMGLALAQPIGEWRVKIIDPSYKTLREKLQKVDTGDMVPTRDMIRRPVRLEVQLNHRKIIESVWVD
TSGEIWETEWQEKNEDDWNDFKEKIGQNIGIILLLPPYKEIVLNHLLKKASSGMTLDPDQLMNAQGWSNNLEDWLRFFNQ
YCSRVDNIAICLHKADLFCESLDDEAIKMQGHPVERQKQVRNRYFAVAKEVINRNNREVRPFQFFITSISNCTLLEAPWL
YLSPFILHYR
>Mature_249_residues
SVIVIGDRAVGKTHMGLALAQPIGEWRVKIIDPSYKTLREKLQKVDTGDMVPTRDMIRRPVRLEVQLNHRKIIESVWVDT
SGEIWETEWQEKNEDDWNDFKEKIGQNIGIILLLPPYKEIVLNHLLKKASSGMTLDPDQLMNAQGWSNNLEDWLRFFNQY
CSRVDNIAICLHKADLFCESLDDEAIKMQGHPVERQKQVRNRYFAVAKEVINRNNREVRPFQFFITSISNCTLLEAPWLY
LSPFILHYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29296; Mature: 29165

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVIVIGDRAVGKTHMGLALAQPIGEWRVKIIDPSYKTLREKLQKVDTGDMVPTRDMIRR
CEEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHCC
PVRLEVQLNHRKIIESVWVDTSGEIWETEWQEKNEDDWNDFKEKIGQNIGIILLLPPYKE
CEEEEEEECHHHHHHHHHCCCCCCEECCHHCCCCCCCHHHHHHHHCCCCCEEEEECCHHH
IVLNHLLKKASSGMTLDPDQLMNAQGWSNNLEDWLRFFNQYCSRVDNIAICLHKADLFCE
HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
SLDDEAIKMQGHPVERQKQVRNRYFAVAKEVINRNNREVRPFQFFITSISNCTLLEAPWL
HCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCHH
YLSPFILHYR
HHHHHHHCCC
>Mature Secondary Structure 
SVIVIGDRAVGKTHMGLALAQPIGEWRVKIIDPSYKTLREKLQKVDTGDMVPTRDMIRR
EEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHCC
PVRLEVQLNHRKIIESVWVDTSGEIWETEWQEKNEDDWNDFKEKIGQNIGIILLLPPYKE
CEEEEEEECHHHHHHHHHCCCCCCEECCHHCCCCCCCHHHHHHHHCCCCCEEEEECCHHH
IVLNHLLKKASSGMTLDPDQLMNAQGWSNNLEDWLRFFNQYCSRVDNIAICLHKADLFCE
HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEHHHHHHH
SLDDEAIKMQGHPVERQKQVRNRYFAVAKEVINRNNREVRPFQFFITSISNCTLLEAPWL
HCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCHH
YLSPFILHYR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA