| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475796
Identifier: 113475796
GI number: 113475796
Start: 3357736
End: 3358503
Strand: Direct
Name: 113475796
Synonym: Tery_2150
Alternate gene names: NA
Gene position: 3357736-3358503 (Clockwise)
Preceding gene: 113475792
Following gene: 113475799
Centisome position: 43.33
GC content: 32.55
Gene sequence:
>768_bases ATGACTAAAAATATCATAAAATTTATAGAAAATTTAGGAAAAATTTTATCTCTATTGCTGCTAGTTTCGACTCTAGCTTC TTGCGCCATTAACACTGGTATAGTTACCAATTCAGATAGTATTTACCAATATAGAACTATTCATAATTATGAAGGTATTG GCAAATTTTATCTAGGTCGAGAAATTGCTAAAGTAATGGGGCATGAAGGCGCAGGATGGTTAGAAAGAGATAGTAGAACT TATCAAGAAAAACCTGAAAGTGCTATTAATAATCTTGAATTAAAATCAACAGATATCGTGGCAGATATTGGTGCTGGTAC TGGCTATTTTACTTTTAGGATGAGTCCTTTAGTTCCAGAGGGAAAGGTACTAGCAATAGATATACAGCCAGAGATGTTAG AGTTAATTAATTTTGTTAATCATGAGGAAAATATTACTAATGTTGAGACAATTTTAGGTGATGTAGATAATCCAAAGATA CCGCCATCTAGTGTTGATATTGCCTTGTTAGTTGATACTTATCATGAGTTTGAATATCCACGAGAAATGATGTTAGGAAT AGTTGAGGGATTGAAACCTGGTGGGCGAGTAGTTTTATTGGAATATCGGAGTGAAAATCCAATGATTATGATTAAGGGTT TACACAAAATGAGTGAAAAACAGGTAAAAAAAGAAATGAAAGCTGTTGGTTTGATTTGGCAAGATACTAGAGATTTTTTA CCACAACAGCATTTTTTAGTGTTTAAAAAGCCTGATATTTCTTTGTGA
Upstream 100 bases:
>100_bases TTAAGCGTTCGGTACTGATAACTGTTTAACTACAGGAGATGAAAAGGGAAGCTCCGACCCAAGAAGGCTAACTCATAACT GAAATAACCAGGTATTTGCT
Downstream 100 bases:
>100_bases AACTAAGGTTAAGAATAATACTAAGTTAATACTATTAGATAATTCAAGAAAAACTACTATAGCAATCTTATTTGAATTCT GAGAATTTGTAGATTTTTGG
Product: type 11 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Methyltransferase Family Protein; Ubiquinone/Menaquinone Biosynthesis Methyltransferase; Transcriptional Regulator ArsR Family; Methyltransferase Domain Family; Methyltransferase Domain Family Protein; Methylase
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MTKNIIKFIENLGKILSLLLLVSTLASCAINTGIVTNSDSIYQYRTIHNYEGIGKFYLGREIAKVMGHEGAGWLERDSRT YQEKPESAINNLELKSTDIVADIGAGTGYFTFRMSPLVPEGKVLAIDIQPEMLELINFVNHEENITNVETILGDVDNPKI PPSSVDIALLVDTYHEFEYPREMMLGIVEGLKPGGRVVLLEYRSENPMIMIKGLHKMSEKQVKKEMKAVGLIWQDTRDFL PQQHFLVFKKPDISL
Sequences:
>Translated_255_residues MTKNIIKFIENLGKILSLLLLVSTLASCAINTGIVTNSDSIYQYRTIHNYEGIGKFYLGREIAKVMGHEGAGWLERDSRT YQEKPESAINNLELKSTDIVADIGAGTGYFTFRMSPLVPEGKVLAIDIQPEMLELINFVNHEENITNVETILGDVDNPKI PPSSVDIALLVDTYHEFEYPREMMLGIVEGLKPGGRVVLLEYRSENPMIMIKGLHKMSEKQVKKEMKAVGLIWQDTRDFL PQQHFLVFKKPDISL >Mature_254_residues TKNIIKFIENLGKILSLLLLVSTLASCAINTGIVTNSDSIYQYRTIHNYEGIGKFYLGREIAKVMGHEGAGWLERDSRTY QEKPESAINNLELKSTDIVADIGAGTGYFTFRMSPLVPEGKVLAIDIQPEMLELINFVNHEENITNVETILGDVDNPKIP PSSVDIALLVDTYHEFEYPREMMLGIVEGLKPGGRVVLLEYRSENPMIMIKGLHKMSEKQVKKEMKAVGLIWQDTRDFLP QQHFLVFKKPDISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28800; Mature: 28669
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNIIKFIENLGKILSLLLLVSTLASCAINTGIVTNSDSIYQYRTIHNYEGIGKFYLGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCHHHHHHH EIAKVMGHEGAGWLERDSRTYQEKPESAINNLELKSTDIVADIGAGTGYFTFRMSPLVPE HHHHHHCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCC GKVLAIDIQPEMLELINFVNHEENITNVETILGDVDNPKIPPSSVDIALLVDTYHEFEYP CCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHCCC REMMLGIVEGLKPGGRVVLLEYRSENPMIMIKGLHKMSEKQVKKEMKAVGLIWQDTRDFL HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHC PQQHFLVFKKPDISL CCCCEEEEECCCCCC >Mature Secondary Structure TKNIIKFIENLGKILSLLLLVSTLASCAINTGIVTNSDSIYQYRTIHNYEGIGKFYLGR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCCHHHHHHH EIAKVMGHEGAGWLERDSRTYQEKPESAINNLELKSTDIVADIGAGTGYFTFRMSPLVPE HHHHHHCCCCCCCCCCCCCHHHHCHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCC GKVLAIDIQPEMLELINFVNHEENITNVETILGDVDNPKIPPSSVDIALLVDTYHEFEYP CCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHCCC REMMLGIVEGLKPGGRVVLLEYRSENPMIMIKGLHKMSEKQVKKEMKAVGLIWQDTRDFL HHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCHHHHC PQQHFLVFKKPDISL CCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA