Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475799

Identifier: 113475799

GI number: 113475799

Start: 3363039

End: 3363776

Strand: Direct

Name: 113475799

Synonym: Tery_2153

Alternate gene names: NA

Gene position: 3363039-3363776 (Clockwise)

Preceding gene: 113475796

Following gene: 113475800

Centisome position: 43.39

GC content: 37.67

Gene sequence:

>738_bases
ATGACACAATCAAATTTGCCAAAACAACAAAATTCTCCCATTATCTCTATCTTACTCTGGCTATTATCAGCAACATATAT
CTACATTCTCCTACTTTCACCCCAAGATCAACTACTTCCTAACGGACCAATTTGGGCGGTTCAACCTGAAACTATTAAAG
AAGTCATTGAGGTATCTATCAATTTTTTCTTCATTCTTCCCATCTTTAATGTTATTGGTATAAAATATATGGAAGCACCG
ATCGTACATCCTTGGTTAGAAAGTTTATTCAACTTTGCTGAAGCTTGGATATTTATGTTTCTTCCCCTCCTGCTTGTCGA
TCGCCGTGGTGGAGAACTTCCAAAAATCTTGATTTGGAGTATGGCAATGTTCCTTACCAATACTTTCTTACTACCATACA
TGGCTTGGCGCAGCACTGCAACTGAACTTCCTATAGAGGAACAAATGAGTAAAGGTTTACTGGCGAAAATATTCGGTGTT
GTCGGATTAATTATAGGCAGCATCGCTATAGTCTGGGGAATTTTCGCTAGACCAGAATTTGGCGATATCGCTACTAGGGG
AAAATTTTTTATACAAAACTTTCAGAGCGATCGCCTCACCATTGCCTTTTGTGTAGATGTAATTTTATTTGCCATTTTTC
AAGCAGTATTAATAGGAAATATTGAACCGCCAGAAAGTGGCAAACGTTGGTTAAGATTTATACCATTTTGGGGATTAGCT
GTTTGGCTAATTTTGTAG

Upstream 100 bases:

>100_bases
TAGTTACCCCACAACAACCTTTAGAAGATATATAATTTTACTCCCCACAACATTGTACTAAAATAAGAACGGCTATAACC
AATACTAAAAAAATTACCCA

Downstream 100 bases:

>100_bases
AAGTTTTGCTTCTATATTGTGTCTCCCATTTTTAGTAGATTTAGGAAGTAGGTACTTGGGCAAAAAAGAGGTACAGTTTA
ATATAAATCTCCATTCCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTQSNLPKQQNSPIISILLWLLSATYIYILLLSPQDQLLPNGPIWAVQPETIKEVIEVSINFFFILPIFNVIGIKYMEAP
IVHPWLESLFNFAEAWIFMFLPLLLVDRRGGELPKILIWSMAMFLTNTFLLPYMAWRSTATELPIEEQMSKGLLAKIFGV
VGLIIGSIAIVWGIFARPEFGDIATRGKFFIQNFQSDRLTIAFCVDVILFAIFQAVLIGNIEPPESGKRWLRFIPFWGLA
VWLIL

Sequences:

>Translated_245_residues
MTQSNLPKQQNSPIISILLWLLSATYIYILLLSPQDQLLPNGPIWAVQPETIKEVIEVSINFFFILPIFNVIGIKYMEAP
IVHPWLESLFNFAEAWIFMFLPLLLVDRRGGELPKILIWSMAMFLTNTFLLPYMAWRSTATELPIEEQMSKGLLAKIFGV
VGLIIGSIAIVWGIFARPEFGDIATRGKFFIQNFQSDRLTIAFCVDVILFAIFQAVLIGNIEPPESGKRWLRFIPFWGLA
VWLIL
>Mature_244_residues
TQSNLPKQQNSPIISILLWLLSATYIYILLLSPQDQLLPNGPIWAVQPETIKEVIEVSINFFFILPIFNVIGIKYMEAPI
VHPWLESLFNFAEAWIFMFLPLLLVDRRGGELPKILIWSMAMFLTNTFLLPYMAWRSTATELPIEEQMSKGLLAKIFGVV
GLIIGSIAIVWGIFARPEFGDIATRGKFFIQNFQSDRLTIAFCVDVILFAIFQAVLIGNIEPPESGKRWLRFIPFWGLAV
WLIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28006; Mature: 27875

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSNLPKQQNSPIISILLWLLSATYIYILLLSPQDQLLPNGPIWAVQPETIKEVIEVSI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEECHHHHHHHHHHHH
NFFFILPIFNVIGIKYMEAPIVHPWLESLFNFAEAWIFMFLPLLLVDRRGGELPKILIWS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MAMFLTNTFLLPYMAWRSTATELPIEEQMSKGLLAKIFGVVGLIIGSIAIVWGIFARPEF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDIATRGKFFIQNFQSDRLTIAFCVDVILFAIFQAVLIGNIEPPESGKRWLRFIPFWGLA
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VWLIL
HHHHC
>Mature Secondary Structure 
TQSNLPKQQNSPIISILLWLLSATYIYILLLSPQDQLLPNGPIWAVQPETIKEVIEVSI
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEECHHHHHHHHHHHH
NFFFILPIFNVIGIKYMEAPIVHPWLESLFNFAEAWIFMFLPLLLVDRRGGELPKILIWS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
MAMFLTNTFLLPYMAWRSTATELPIEEQMSKGLLAKIFGVVGLIIGSIAIVWGIFARPEF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GDIATRGKFFIQNFQSDRLTIAFCVDVILFAIFQAVLIGNIEPPESGKRWLRFIPFWGLA
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
VWLIL
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA