| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475762
Identifier: 113475762
GI number: 113475762
Start: 3304421
End: 3304627
Strand: Direct
Name: 113475762
Synonym: Tery_2115
Alternate gene names: NA
Gene position: 3304421-3304627 (Clockwise)
Preceding gene: 113475761
Following gene: 113475763
Centisome position: 42.64
GC content: 31.4
Gene sequence:
>207_bases ATGTTAACAAATCCTCATTCAAATCGGCCTAATTATGGAGCGATTTCTACAGGTGACGGTTTTATGTTTATTAAATTAGT TAATGGAGAAATACCGCAATATGCTCTTTCTCAAGGATTTTTTACTTTTCATCCTGGTAATAAACTTTATGATGTACTTC CCATTCTCAAACCCTTAACTGAAATTGTCTTAAAAAGAATTGAATAG
Upstream 100 bases:
>100_bases TGATAAATTAGCGTTAAAAGACCAATTTTAGAGAATAGTAATTGAGTCTAAAAAAGCTGAATTTTCTCTAGAAGCTGGGC GGGGTCAAATTCTTGCTTAT
Downstream 100 bases:
>100_bases AGTATAGCTGAAGTCATTTCAGTTATCAGTTATCGGTTATCAGTATCTCTGGGTTCAGCTAAAGGCTTGAAATGCTGAAG TTTATTTTTTTCCGAACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MLTNPHSNRPNYGAISTGDGFMFIKLVNGEIPQYALSQGFFTFHPGNKLYDVLPILKPLTEIVLKRIE
Sequences:
>Translated_68_residues MLTNPHSNRPNYGAISTGDGFMFIKLVNGEIPQYALSQGFFTFHPGNKLYDVLPILKPLTEIVLKRIE >Mature_68_residues MLTNPHSNRPNYGAISTGDGFMFIKLVNGEIPQYALSQGFFTFHPGNKLYDVLPILKPLTEIVLKRIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7664; Mature: 7664
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTNPHSNRPNYGAISTGDGFMFIKLVNGEIPQYALSQGFFTFHPGNKLYDVLPILKPLT CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHH EIVLKRIE HHHHHHCC >Mature Secondary Structure MLTNPHSNRPNYGAISTGDGFMFIKLVNGEIPQYALSQGFFTFHPGNKLYDVLPILKPLT CCCCCCCCCCCCCEEECCCCEEEEEEECCCCCCHHHHCCCEEECCCCCHHHHHHHHHHHH EIVLKRIE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA