Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475674

Identifier: 113475674

GI number: 113475674

Start: 3142781

End: 3143446

Strand: Direct

Name: 113475674

Synonym: Tery_2014

Alternate gene names: NA

Gene position: 3142781-3143446 (Clockwise)

Preceding gene: 113475673

Following gene: 113475679

Centisome position: 40.55

GC content: 41.29

Gene sequence:

>666_bases
TTGATTAAGAAACTTGCAGATTTTGATGGCCAGATTACGGATGCCAATAAACAATTGCAAACATACACAGGCCAGCAATC
GCAGATTTTGACACTTGCTAACCAGAATGTTGGATCGATTAAAACTACGATTGAGCAATTACGTCGTGAAGCTGATGCAG
CGGAGAAAACTTGGAAAGACTATACTATTGCAGCGGTAACAACTTCAATTGGAATAACAGTTCTATCTGGAGGATTGTTG
TGGTTTGTTGGCGCGGCAGCAGGCATTGGCCTAGGGATCAAGGCTGATACTCAAAAGGCGAAATACAACGCACTCATCGG
TGAAATTGGGACGCAAAATGTGGAACTAAGTAAGAAATCGCGCTTAGTTACCGATCTAACAGGATTAAATACTCAGATTG
GAAATGTTGCTCCAGCATTAGCTGATTTCAAAAATCAGCTTCAACAAATTCAAGGGGTTTGGGTAGGAGTGAGTGGGAAT
TTGCAATATATTGCAACTAACTATGGTGTAGACCAGTTAAGCAGCCTTCCCTGGATTACTCAAGCCATGAAAATAGGTGA
TGCAACTAAGAAGTGGCAGGAGATTGGAAGAACAACAGAACAATTTATAACCCATTCCTTGGTTAGCTATAACCAGGATA
CTACTTGGGGTCAACAGATTGCTTAA

Upstream 100 bases:

>100_bases
GAATGGGGACAAAAGAGGAGCGTGCAGAGTATCTTAGGGAAATTTTAGTTGGTCAAGGTGGACTAGTATCCACTGCCGAA
GATATGAAGAAACCGATGCC

Downstream 100 bases:

>100_bases
TTGTGTTGAGCTGGTGATATTTCATTAATCTGGGGAGATAGACAAATTTCCATCACCTTTTTAGCCAGTTTAGCCTGTTT
TTACTAGAGTTGTTGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL
WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN
LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA

Sequences:

>Translated_221_residues
MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL
WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN
LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA
>Mature_221_residues
MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKDYTIAAVTTSIGITVLSGGLL
WFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKSRLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGN
LQYIATNYGVDQLSSLPWITQAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24007; Mature: 24007

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKD
CCCCCCCCCCCEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
YTIAAVTTSIGITVLSGGLLWFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKS
EEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
RLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGNLQYIATNYGVDQLSSLPWIT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHCCHHHH
QAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MIKKLADFDGQITDANKQLQTYTGQQSQILTLANQNVGSIKTTIEQLRREADAAEKTWKD
CCCCCCCCCCCEECCCHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCC
YTIAAVTTSIGITVLSGGLLWFVGAAAGIGLGIKADTQKAKYNALIGEIGTQNVELSKKS
EEEEEHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHH
RLVTDLTGLNTQIGNVAPALADFKNQLQQIQGVWVGVSGNLQYIATNYGVDQLSSLPWIT
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCHHHHHCCHHHH
QAMKIGDATKKWQEIGRTTEQFITHSLVSYNQDTTWGQQIA
HHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA