Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475679

Identifier: 113475679

GI number: 113475679

Start: 3148004

End: 3148585

Strand: Direct

Name: 113475679

Synonym: Tery_2019

Alternate gene names: NA

Gene position: 3148004-3148585 (Clockwise)

Preceding gene: 113475674

Following gene: 113475683

Centisome position: 40.62

GC content: 31.79

Gene sequence:

>582_bases
ATGCAGTTGATCCATGAATTGTTCGATATAAATACTAGACTAAACATTGCAATTTGTAGACCTATACTTATATTACTATC
AAGCATATTTTGGCCTCTCCTTAGCCAAGCACAATTACCTCGTTTTGATTATCCCATACCTCAATCCCCTTCTCAAGGAA
AACAGTCTTCAACGACATCACCATCAAGTCCTCTTCAAAGTAAGTCTTCAGAACAATCAATTATTAATGATTCAACACCT
TCTTTACAACTAGAAAGACAATTGCCTCTGAGAATTATCAAACCTGTTAATGGTTTTGTCAATATTAAACTTACAAATAA
AACTGCTGCTAAAATTTCTTATGAGGTAATTGGAGATACCACACAACGTCAGTTGTCAGGAAAATCAGAAGTTATTTTAA
AGACGTTGAAAGTTCCTATAAATATCACTTTCTACAGAGAGACAGGAGGATTTTTATTTATACAAACACTGTTCACTTCT
GAAAAGTGTCTTTTAGAGCTTATTATGACTGAAACTAATGATTTTAATTTAGATAAATCTAGTTTGTTAATAGAGGAAAC
TGGCAGTTTATTTTTAAATTAG

Upstream 100 bases:

>100_bases
CCAATCGTAATTTTTCATTAGCCTTTTCATCTAAAACTTTTCTGATATGATAGTAGGTATTTAATTAAAAACAAATATTA
AATTATTTAACCAAATAATT

Downstream 100 bases:

>100_bases
TTATTCCTTAAATACTAATATCTTTTAATTATATTAAATTGATTTTTTAATATACTTATTTAGCACTACTTAAATTTGCT
CTAGACAATTTTTATCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MQLIHELFDINTRLNIAICRPILILLSSIFWPLLSQAQLPRFDYPIPQSPSQGKQSSTTSPSSPLQSKSSEQSIINDSTP
SLQLERQLPLRIIKPVNGFVNIKLTNKTAAKISYEVIGDTTQRQLSGKSEVILKTLKVPINITFYRETGGFLFIQTLFTS
EKCLLELIMTETNDFNLDKSSLLIEETGSLFLN

Sequences:

>Translated_193_residues
MQLIHELFDINTRLNIAICRPILILLSSIFWPLLSQAQLPRFDYPIPQSPSQGKQSSTTSPSSPLQSKSSEQSIINDSTP
SLQLERQLPLRIIKPVNGFVNIKLTNKTAAKISYEVIGDTTQRQLSGKSEVILKTLKVPINITFYRETGGFLFIQTLFTS
EKCLLELIMTETNDFNLDKSSLLIEETGSLFLN
>Mature_193_residues
MQLIHELFDINTRLNIAICRPILILLSSIFWPLLSQAQLPRFDYPIPQSPSQGKQSSTTSPSSPLQSKSSEQSIINDSTP
SLQLERQLPLRIIKPVNGFVNIKLTNKTAAKISYEVIGDTTQRQLSGKSEVILKTLKVPINITFYRETGGFLFIQTLFTS
EKCLLELIMTETNDFNLDKSSLLIEETGSLFLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21702; Mature: 21702

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIHELFDINTRLNIAICRPILILLSSIFWPLLSQAQLPRFDYPIPQSPSQGKQSSTTS
CHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PSSPLQSKSSEQSIINDSTPSLQLERQLPLRIIKPVNGFVNIKLTNKTAAKISYEVIGDT
CCCCCCCCCCCHHHCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCC
TQRQLSGKSEVILKTLKVPINITFYRETGGFLFIQTLFTSEKCLLELIMTETNDFNLDKS
HHHHHCCCHHHHHHEEECCEEEEEEECCCCEEEEEEHHCCHHHHHHHHHHCCCCCCCCHH
SLLIEETGSLFLN
HEEEEECCCEECC
>Mature Secondary Structure
MQLIHELFDINTRLNIAICRPILILLSSIFWPLLSQAQLPRFDYPIPQSPSQGKQSSTTS
CHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PSSPLQSKSSEQSIINDSTPSLQLERQLPLRIIKPVNGFVNIKLTNKTAAKISYEVIGDT
CCCCCCCCCCCHHHCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCC
TQRQLSGKSEVILKTLKVPINITFYRETGGFLFIQTLFTSEKCLLELIMTETNDFNLDKS
HHHHHCCCHHHHHHEEECCEEEEEEECCCCEEEEEEHHCCHHHHHHHHHHCCCCCCCCHH
SLLIEETGSLFLN
HEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA