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The map label for this gene is ydjX [C]

Identifier: 113475656

GI number: 113475656

Start: 3108044

End: 3108772

Strand: Direct

Name: ydjX [C]

Synonym: Tery_1993

Alternate gene names: 113475656

Gene position: 3108044-3108772 (Clockwise)

Preceding gene: 113475636

Following gene: 113475657

Centisome position: 40.1

GC content: 38.82

Gene sequence:

>729_bases
ATGAACGAAATACAAGAAACACCAAAAAAAAAGCTAACACTAAACAAGCTAATCAAACCCCTCTTAATTATATTTGGAGT
AGCTACTCTCTTAACTATTGCTCAGAAATTTTTTAATGCTCAACAACTATTGGAAAATGCCTTAAATTGGATTGATACAC
TTAGCCCCTGGGGCCCGATAGCTTTTATTACTATCTATATTTTGGCCACAGTTTTATTTCTACCTGGCTCACTACTAACC
CTTGGTGCAGGTTTCCTTTTCGGCCCTCTTTTTGGTTCTATTTACGTCTCTATCGGTTCAACTATAGGTGCAACTTTTGC
TTTCTTAGTCGGTCGCTATCTAGCACGGGGTTGGGTTTACAAACAAATTGAAGGAAATGAAGAATTTAAGGCCATTGACA
AAGCTGTAGCCGATGAGGGATGGAAAATTGTTGGCCTAACCCGTTTGTCTCCCATTTTTCCTTTTAACTTGCTTAATTAT
GCTTTTGGCCTAACTCAAGTTTCTCTACAACACTATTTTTTTGCATCTTGGATCGGAATGATGCCAGGAACAGTAATGTA
TGTATATTTGGGATCCTTGGCTGGTAGTTTGGCAACTTTGGGTACAGAAGAGCGATCGCGCACCACCACAGAATGGGTTC
TCTATGGAGTAGGTTTAATAGCCACAGTTGCTGTAACTTTTTACGTTACCAAAATCGCTAAAAAAGCCTTACAAAAGAAA
ATATCCTAG

Upstream 100 bases:

>100_bases
AATATTCAGCTATTATTTATTACCTTTCATCCTAAATTTTGACTTGTTTTTTTATGCTAAATACTTATTAATATAAAGAT
AAATTTTAAGTTTATATACT

Downstream 100 bases:

>100_bases
TGTATGTGTTGTAAAAATTAGTAATATTATTTTTTTGTTAAATTTTCTTGGCTTCAGGCTTTTTTTACAATATTTATAAG
TATATTAATTTGTGTAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNEIQETPKKKLTLNKLIKPLLIIFGVATLLTIAQKFFNAQQLLENALNWIDTLSPWGPIAFITIYILATVLFLPGSLLT
LGAGFLFGPLFGSIYVSIGSTIGATFAFLVGRYLARGWVYKQIEGNEEFKAIDKAVADEGWKIVGLTRLSPIFPFNLLNY
AFGLTQVSLQHYFFASWIGMMPGTVMYVYLGSLAGSLATLGTEERSRTTTEWVLYGVGLIATVAVTFYVTKIAKKALQKK
IS

Sequences:

>Translated_242_residues
MNEIQETPKKKLTLNKLIKPLLIIFGVATLLTIAQKFFNAQQLLENALNWIDTLSPWGPIAFITIYILATVLFLPGSLLT
LGAGFLFGPLFGSIYVSIGSTIGATFAFLVGRYLARGWVYKQIEGNEEFKAIDKAVADEGWKIVGLTRLSPIFPFNLLNY
AFGLTQVSLQHYFFASWIGMMPGTVMYVYLGSLAGSLATLGTEERSRTTTEWVLYGVGLIATVAVTFYVTKIAKKALQKK
IS
>Mature_242_residues
MNEIQETPKKKLTLNKLIKPLLIIFGVATLLTIAQKFFNAQQLLENALNWIDTLSPWGPIAFITIYILATVLFLPGSLLT
LGAGFLFGPLFGSIYVSIGSTIGATFAFLVGRYLARGWVYKQIEGNEEFKAIDKAVADEGWKIVGLTRLSPIFPFNLLNY
AFGLTQVSLQHYFFASWIGMMPGTVMYVYLGSLAGSLATLGTEERSRTTTEWVLYGVGLIATVAVTFYVTKIAKKALQKK
IS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Homo sapiens, GI223555958, Length=206, Percent_Identity=29.6116504854369, Blast_Score=85, Evalue=6e-17,
Organism=Escherichia coli, GI87081964, Length=131, Percent_Identity=38.9312977099237, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1788049, Length=143, Percent_Identity=30.0699300699301, Blast_Score=67, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21356469, Length=205, Percent_Identity=28.2926829268293, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26710; Mature: 26710

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure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CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]