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The map label for this gene is 113475616

Identifier: 113475616

GI number: 113475616

Start: 3025997

End: 3026461

Strand: Direct

Name: 113475616

Synonym: Tery_1951

Alternate gene names: NA

Gene position: 3025997-3026461 (Clockwise)

Preceding gene: 113475612

Following gene: 113475617

Centisome position: 39.04

GC content: 36.13

Gene sequence:

>465_bases
GTGCTATTAAATCCAACTATATTTTGGTTACTAGCTGGGGCAACACTTTGTTTTTTAGAATTCTTTGTGCCCACGGCTTT
TGTTGAATTTATGATGGGACTGAGTGCCTTTGTTGTGGCACTTGTGTCCCTCTTAATTCCTAGTGTGAGTTTACAGGTAG
CCTTGTGGATGATTTTTTCTGTAGCTTCTATTTTTGCTTTCCGTTATCTGTTGCCCCACCGTAAAATAGCTATTATTGCT
GATTCCAAGGAAGGAGAAACTTTAACAGAAATATTACCAGGTCAGCCTGGTAGAGTACTCTATGAAGGTAATTCTTGGCG
AGCTAAATGTGACGATCAAGATATTATGATTCCTGCTCAAGAAAAAGTTATTGTCCTTAGACGAGAAGGTAATACTTTAT
TTATATTGCCAGAAAATTTATTAAATTCTTCAGTTTATCTTCCCAACCAAAATCAATTGAAATAA

Upstream 100 bases:

>100_bases
GGTTGAAATCTCCTGTTTAGCCTAAAAAAAAATGCTTTTGCTAATTTTGTTAAATACTAACCGCTGATAACTTCTTTAAT
CTCACTGATCCTATTTATCC

Downstream 100 bases:

>100_bases
CAGCTAATACAAATCCTTAAAAATTTTGCTATACTTAATATTTTCGATCTCTAAATACTATTTATTGAGGTAATTTTATT
CTTAACTCACCTCTATGATA

Product: hypothetical protein

Products: NA

Alternate protein names: Nodulation Efficiency Family Protein; Nodulation Efficiency Protein NfeD

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLLNPTIFWLLAGATLCFLEFFVPTAFVEFMMGLSAFVVALVSLLIPSVSLQVALWMIFSVASIFAFRYLLPHRKIAIIA
DSKEGETLTEILPGQPGRVLYEGNSWRAKCDDQDIMIPAQEKVIVLRREGNTLFILPENLLNSSVYLPNQNQLK

Sequences:

>Translated_154_residues
MLLNPTIFWLLAGATLCFLEFFVPTAFVEFMMGLSAFVVALVSLLIPSVSLQVALWMIFSVASIFAFRYLLPHRKIAIIA
DSKEGETLTEILPGQPGRVLYEGNSWRAKCDDQDIMIPAQEKVIVLRREGNTLFILPENLLNSSVYLPNQNQLK
>Mature_154_residues
MLLNPTIFWLLAGATLCFLEFFVPTAFVEFMMGLSAFVVALVSLLIPSVSLQVALWMIFSVASIFAFRYLLPHRKIAIIA
DSKEGETLTEILPGQPGRVLYEGNSWRAKCDDQDIMIPAQEKVIVLRREGNTLFILPENLLNSSVYLPNQNQLK

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17320; Mature: 17320

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNPTIFWLLAGATLCFLEFFVPTAFVEFMMGLSAFVVALVSLLIPSVSLQVALWMIFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VASIFAFRYLLPHRKIAIIADSKEGETLTEILPGQPGRVLYEGNSWRAKCDDQDIMIPAQ
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCEECCCCCCEEEECC
EKVIVLRREGNTLFILPENLLNSSVYLPNQNQLK
CEEEEEEECCCEEEEEEHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MLLNPTIFWLLAGATLCFLEFFVPTAFVEFMMGLSAFVVALVSLLIPSVSLQVALWMIFS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VASIFAFRYLLPHRKIAIIADSKEGETLTEILPGQPGRVLYEGNSWRAKCDDQDIMIPAQ
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCCCCEEEEECCCCEECCCCCCEEEECC
EKVIVLRREGNTLFILPENLLNSSVYLPNQNQLK
CEEEEEEECCCEEEEEEHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA