Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475611

Identifier: 113475611

GI number: 113475611

Start: 3015717

End: 3016298

Strand: Direct

Name: 113475611

Synonym: Tery_1945

Alternate gene names: NA

Gene position: 3015717-3016298 (Clockwise)

Preceding gene: 113475608

Following gene: 113475612

Centisome position: 38.91

GC content: 31.44

Gene sequence:

>582_bases
ATGAAATTAAAAACAAAACTATACACTGATGCTGTCAAAGAGGCATTACTTTCCTTATCAGACATAGAATTTTATAATAC
TATACACTATTGGCTTGAACGAATATCTAAAAATTATTGGGAAACAGAATTATTAGATGAAATGCAGCTGGCTTTAGGTT
ATACATTAGAGTCAGGAGAAACCCTACAATCTTACAAAAATTGGGATGAATTAATGTGTGCTGAACCTGACTGTAAAAAT
GTCTATTTAATCGCACCATCACCTTTAAAATTACGCAGGTACTTATATCAAATGGATTCACATTCTTTTTATGAAAATAT
AATTTATCTAGCAGGAGTTGCTTATACAGATGGACAAATAGGTGAACCTCCAAATGCTTTTTGTGACGGATATGAATTTA
TGGAAAACTTAGTTGCAAATCTCAGGAAAAATCAACCTAACCAAGAAATAAATTATCCCCCACAAACTATCCCAATTATG
AATCAAATTCAGTCAAACGAAAAGCTTTTTCAAGTATCAGAATATTGGCGGAGTTATAGTGGAGGTAAAGTAACTGATTT
TGTACTTTTAACATCTAATTAG

Upstream 100 bases:

>100_bases
TAGGTAAATAATTTTGTAATACTACTTATCTACCTGAGAAAAGCCAATTAATTAAACTAAGTCAAAGTCGATTAAACAAA
CAAAAAAAGGGGGTAATACT

Downstream 100 bases:

>100_bases
AAGGAAAGAAAAAGGAAGAAATAGGAAGCACATCAATATATTGATAGAACTTCTTGTAAATAACTATTTGATCTAATTAC
CTATTCTCTCATCTGATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKLKTKLYTDAVKEALLSLSDIEFYNTIHYWLERISKNYWETELLDEMQLALGYTLESGETLQSYKNWDELMCAEPDCKN
VYLIAPSPLKLRRYLYQMDSHSFYENIIYLAGVAYTDGQIGEPPNAFCDGYEFMENLVANLRKNQPNQEINYPPQTIPIM
NQIQSNEKLFQVSEYWRSYSGGKVTDFVLLTSN

Sequences:

>Translated_193_residues
MKLKTKLYTDAVKEALLSLSDIEFYNTIHYWLERISKNYWETELLDEMQLALGYTLESGETLQSYKNWDELMCAEPDCKN
VYLIAPSPLKLRRYLYQMDSHSFYENIIYLAGVAYTDGQIGEPPNAFCDGYEFMENLVANLRKNQPNQEINYPPQTIPIM
NQIQSNEKLFQVSEYWRSYSGGKVTDFVLLTSN
>Mature_193_residues
MKLKTKLYTDAVKEALLSLSDIEFYNTIHYWLERISKNYWETELLDEMQLALGYTLESGETLQSYKNWDELMCAEPDCKN
VYLIAPSPLKLRRYLYQMDSHSFYENIIYLAGVAYTDGQIGEPPNAFCDGYEFMENLVANLRKNQPNQEINYPPQTIPIM
NQIQSNEKLFQVSEYWRSYSGGKVTDFVLLTSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22583; Mature: 22583

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTKLYTDAVKEALLSLSDIEFYNTIHYWLERISKNYWETELLDEMQLALGYTLESGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
TLQSYKNWDELMCAEPDCKNVYLIAPSPLKLRRYLYQMDSHSFYENIIYLAGVAYTDGQI
HHHHHCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCC
GEPPNAFCDGYEFMENLVANLRKNQPNQEINYPPQTIPIMNQIQSNEKLFQVSEYWRSYS
CCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCC
GGKVTDFVLLTSN
CCCEEEEEEEECC
>Mature Secondary Structure
MKLKTKLYTDAVKEALLSLSDIEFYNTIHYWLERISKNYWETELLDEMQLALGYTLESGE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
TLQSYKNWDELMCAEPDCKNVYLIAPSPLKLRRYLYQMDSHSFYENIIYLAGVAYTDGQI
HHHHHCCHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCC
GEPPNAFCDGYEFMENLVANLRKNQPNQEINYPPQTIPIMNQIQSNEKLFQVSEYWRSYS
CCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCC
GGKVTDFVLLTSN
CCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA