| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475556
Identifier: 113475556
GI number: 113475556
Start: 2886804
End: 2887118
Strand: Direct
Name: 113475556
Synonym: Tery_1888
Alternate gene names: NA
Gene position: 2886804-2887118 (Clockwise)
Preceding gene: 113475555
Following gene: 113475557
Centisome position: 37.25
GC content: 34.29
Gene sequence:
>315_bases ATGGATAAACCATCAACATCAACAGGCTTAATTACAGGACTAGTAGCGACTCTATTTTTTAGTATTAGTTTTAGCTTACT AGAGTATACAATAAAATCAAGTATTATACTTGGTTTTATTGGGGGAATTTCTGCTGGATTATTAGGGTTTTGGTCCCAAA TAGAATCAAGACCAGAAACCCCAGAAAAAGCAGATGCTAAGTCTGTAGATTCTATCAAATTATCAAAATCAACCTCAGTA ATTAAACCACGGCTTCAAACACCTAAAGAGCGTAGTGGTGTTTCTGTATTGAGTTGGTTGTTTAAGCAAAAGTAA
Upstream 100 bases:
>100_bases AAACCAGGAGTTAAAACTTAGTATTTAATTGTGTATAGTTAAGTAGACTTGATACAATGTTTAAAATATCAATCACTTAA TCCCTTGGCTAAAGCAAAGC
Downstream 100 bases:
>100_bases ATGAGTTTGGTCAAAATCTTATATTAACTATTGGTAAACCCTAAGTATTTATGCCAAATTAATTATATATAATTGCTGGT ATTGAACAACTTACAAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 104; Mature: 104
Protein sequence:
>104_residues MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV IKPRLQTPKERSGVSVLSWLFKQK
Sequences:
>Translated_104_residues MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV IKPRLQTPKERSGVSVLSWLFKQK >Mature_104_residues MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV IKPRLQTPKERSGVSVLSWLFKQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11281; Mature: 11281
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEKADAKSVDSIKLSKSTSVIKPRLQTPKERSGVSVLSWLFKQK CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PEKADAKSVDSIKLSKSTSVIKPRLQTPKERSGVSVLSWLFKQK CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA