Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475556

Identifier: 113475556

GI number: 113475556

Start: 2886804

End: 2887118

Strand: Direct

Name: 113475556

Synonym: Tery_1888

Alternate gene names: NA

Gene position: 2886804-2887118 (Clockwise)

Preceding gene: 113475555

Following gene: 113475557

Centisome position: 37.25

GC content: 34.29

Gene sequence:

>315_bases
ATGGATAAACCATCAACATCAACAGGCTTAATTACAGGACTAGTAGCGACTCTATTTTTTAGTATTAGTTTTAGCTTACT
AGAGTATACAATAAAATCAAGTATTATACTTGGTTTTATTGGGGGAATTTCTGCTGGATTATTAGGGTTTTGGTCCCAAA
TAGAATCAAGACCAGAAACCCCAGAAAAAGCAGATGCTAAGTCTGTAGATTCTATCAAATTATCAAAATCAACCTCAGTA
ATTAAACCACGGCTTCAAACACCTAAAGAGCGTAGTGGTGTTTCTGTATTGAGTTGGTTGTTTAAGCAAAAGTAA

Upstream 100 bases:

>100_bases
AAACCAGGAGTTAAAACTTAGTATTTAATTGTGTATAGTTAAGTAGACTTGATACAATGTTTAAAATATCAATCACTTAA
TCCCTTGGCTAAAGCAAAGC

Downstream 100 bases:

>100_bases
ATGAGTTTGGTCAAAATCTTATATTAACTATTGGTAAACCCTAAGTATTTATGCCAAATTAATTATATATAATTGCTGGT
ATTGAACAACTTACAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV
IKPRLQTPKERSGVSVLSWLFKQK

Sequences:

>Translated_104_residues
MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV
IKPRLQTPKERSGVSVLSWLFKQK
>Mature_104_residues
MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPETPEKADAKSVDSIKLSKSTSV
IKPRLQTPKERSGVSVLSWLFKQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11281; Mature: 11281

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEKADAKSVDSIKLSKSTSVIKPRLQTPKERSGVSVLSWLFKQK
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MDKPSTSTGLITGLVATLFFSISFSLLEYTIKSSIILGFIGGISAGLLGFWSQIESRPET
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PEKADAKSVDSIKLSKSTSVIKPRLQTPKERSGVSVLSWLFKQK
CCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA