Click here to switch to the map view.

The map label for this gene is ygiC [H]

Identifier: 113475544

GI number: 113475544

Start: 2870936

End: 2872063

Strand: Direct

Name: ygiC [H]

Synonym: Tery_1876

Alternate gene names: 113475544

Gene position: 2870936-2872063 (Clockwise)

Preceding gene: 113475543

Following gene: 113475549

Centisome position: 37.04

GC content: 35.64

Gene sequence:

>1128_bases
ATGAAACGCATAAATATTGAACCTCGTGCTAACTGGCAGCAGAAATGTGAAGCGGTTGGCTTTCATTTTTATAATATGTA
CAGTCAACCATATTGGTATGAGTCGGCTTGTTATCATTTTAGCACTTCAGAAATAAATGAACTGGAAGTAGCAACCAATG
CTTTACAAGAATTGTATATTGAAGCAGCAGAGCTAATTATCCAAGAAGATCGTTTTTCCCAATTGTGTATTCCGCCAGAG
TTTGTGGAGTTATGTCGCCAGTCTTGGGAACGGGATGATCCGAGTCTTTATGGTCGTTTTGACCTTGCTTATGATGGTAT
CAACCCACCGAAATTATTGGAATATAATGCTGATACTCCCACTGCTCTTTTGGAAACTAGTGTGGTACAGTGGACTTGGT
TAGAAGAAATATTTCCTGAAGCGGATCAATTTAATTCTGTGCATGAAAAGTTATTGGCAAGTTTTTTGGAAATGAATGGT
TTAGGGGGAGAGACTTTATATTTCAGTTGTGAAAGAGAAACTTTAGAAGATTTGGGAACGGTTGAATATTTGAGAGATTT
GGCAATTCAAGCAGGATTAAATACTCAACATATTTATATTGATGATATTGGTTGGAGTGAAGATTTAGAAATTTTTTGTG
ATTTGGATAATCAAATTATTCGTCACTTATTCAAGTTGTATCCTTGGGAATGGATGATGGGAGAAAATTTCGGGAAATAT
CTATTATTAGAACCAATGAAAATGATTGAACCTGCCTGGAAATTAATTTGGAGTAATAAAGCTATTCTGCCAATTTTGTG
GGAATTTTTTCCCGATCATCCTAATTTATTGCCTGCCTATTTCGACTCTAGCAAATTATCTCATCCCTATCTGAGCAAGC
CAGTTTTTTCTAGAGAAGGAGGAAATATTACTGTTTATTTTGGAGATAGAGAATATCAAACCGAAGGAATATATGAGAAT
GAGCCTGTAATTTATCAATCCTATTATCAACTGCCGAATTTTGATAGTTATTATCCTGTGGTTGGTGCTTGGGTTATTGG
TGGAGAAGCTGCTGGTATTTGTCTGAGGGAAGACAAAGAAATTGTGACTCAAGATTTAAGTAGATTTGTACCTCATTATT
TTACATGA

Upstream 100 bases:

>100_bases
GGTAGTAGAGGTGGTAGAGGTAGTGGTAGCAGTTTGGGTGGTAGAGGCGGTGGCAAAGGTTGAGCAAACCCCAAATTAAA
ATTTCAAAATAAAACAGCAA

Downstream 100 bases:

>100_bases
ATTATCAAAAAGTAGTTGTTTGTTGTTGCACTCTCAAAAATTAACCTATTCGATGAGTGATTCTCTGAGCTTGGAACATG
AGGTCATTCCCGACCTCTCC

Product: glutathionylspermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKRINIEPRANWQQKCEAVGFHFYNMYSQPYWYESACYHFSTSEINELEVATNALQELYIEAAELIIQEDRFSQLCIPPE
FVELCRQSWERDDPSLYGRFDLAYDGINPPKLLEYNADTPTALLETSVVQWTWLEEIFPEADQFNSVHEKLLASFLEMNG
LGGETLYFSCERETLEDLGTVEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDLDNQIIRHLFKLYPWEWMMGENFGKY
LLLEPMKMIEPAWKLIWSNKAILPILWEFFPDHPNLLPAYFDSSKLSHPYLSKPVFSREGGNITVYFGDREYQTEGIYEN
EPVIYQSYYQLPNFDSYYPVVGAWVIGGEAAGICLREDKEIVTQDLSRFVPHYFT

Sequences:

>Translated_375_residues
MKRINIEPRANWQQKCEAVGFHFYNMYSQPYWYESACYHFSTSEINELEVATNALQELYIEAAELIIQEDRFSQLCIPPE
FVELCRQSWERDDPSLYGRFDLAYDGINPPKLLEYNADTPTALLETSVVQWTWLEEIFPEADQFNSVHEKLLASFLEMNG
LGGETLYFSCERETLEDLGTVEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDLDNQIIRHLFKLYPWEWMMGENFGKY
LLLEPMKMIEPAWKLIWSNKAILPILWEFFPDHPNLLPAYFDSSKLSHPYLSKPVFSREGGNITVYFGDREYQTEGIYEN
EPVIYQSYYQLPNFDSYYPVVGAWVIGGEAAGICLREDKEIVTQDLSRFVPHYFT
>Mature_375_residues
MKRINIEPRANWQQKCEAVGFHFYNMYSQPYWYESACYHFSTSEINELEVATNALQELYIEAAELIIQEDRFSQLCIPPE
FVELCRQSWERDDPSLYGRFDLAYDGINPPKLLEYNADTPTALLETSVVQWTWLEEIFPEADQFNSVHEKLLASFLEMNG
LGGETLYFSCERETLEDLGTVEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDLDNQIIRHLFKLYPWEWMMGENFGKY
LLLEPMKMIEPAWKLIWSNKAILPILWEFFPDHPNLLPAYFDSSKLSHPYLSKPVFSREGGNITVYFGDREYQTEGIYEN
EPVIYQSYYQLPNFDSYYPVVGAWVIGGEAAGICLREDKEIVTQDLSRFVPHYFT

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=44.559585492228, Blast_Score=336, Evalue=2e-93,
Organism=Escherichia coli, GI1790629, Length=389, Percent_Identity=42.159383033419, Blast_Score=309, Evalue=2e-85,
Organism=Escherichia coli, GI1789361, Length=372, Percent_Identity=26.6129032258064, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 44027; Mature: 44027

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRINIEPRANWQQKCEAVGFHFYNMYSQPYWYESACYHFSTSEINELEVATNALQELYI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCHHHHHHHHHHHHHHH
EAAELIIQEDRFSQLCIPPEFVELCRQSWERDDPSLYGRFDLAYDGINPPKLLEYNADTP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEECCCCC
TALLETSVVQWTWLEEIFPEADQFNSVHEKLLASFLEMNGLGGETLYFSCERETLEDLGT
HHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHH
VEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDLDNQIIRHLFKLYPWEWMMGENFGKY
HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCEECCCCCCCE
LLLEPMKMIEPAWKLIWSNKAILPILWEFFPDHPNLLPAYFDSSKLSHPYLSKPVFSREG
EEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
GNITVYFGDREYQTEGIYENEPVIYQSYYQLPNFDSYYPVVGAWVIGGEAAGICLREDKE
CEEEEEECCCEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCHH
IVTQDLSRFVPHYFT
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRINIEPRANWQQKCEAVGFHFYNMYSQPYWYESACYHFSTSEINELEVATNALQELYI
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCEEECCCCCCHHHHHHHHHHHHHHH
EAAELIIQEDRFSQLCIPPEFVELCRQSWERDDPSLYGRFDLAYDGINPPKLLEYNADTP
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCEEEECCCCC
TALLETSVVQWTWLEEIFPEADQFNSVHEKLLASFLEMNGLGGETLYFSCERETLEDLGT
HHHHHHHHHHEEHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHH
VEYLRDLAIQAGLNTQHIYIDDIGWSEDLEIFCDLDNQIIRHLFKLYPWEWMMGENFGKY
HHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHHHCCCCEECCCCCCCE
LLLEPMKMIEPAWKLIWSNKAILPILWEFFPDHPNLLPAYFDSSKLSHPYLSKPVFSREG
EEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
GNITVYFGDREYQTEGIYENEPVIYQSYYQLPNFDSYYPVVGAWVIGGEAAGICLREDKE
CEEEEEECCCEECCCCCCCCCCEEEEHHHCCCCCCCCCCCCEEEEECCCCCCEEEECCHH
IVTQDLSRFVPHYFT
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]