Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475543

Identifier: 113475543

GI number: 113475543

Start: 2870485

End: 2870898

Strand: Direct

Name: 113475543

Synonym: Tery_1875

Alternate gene names: NA

Gene position: 2870485-2870898 (Clockwise)

Preceding gene: 113475542

Following gene: 113475544

Centisome position: 37.04

GC content: 40.34

Gene sequence:

>414_bases
ATGACTGAGCCAAGAAAAATCAAGAGAAGCATTGTTATTACTCTAGTATTAATATCCTCAATTTCTTTAATAGCCTGCGC
ATCTCGTAGATACAGGCGCGAAGTCTATAGAAGTCTTGAAGACTGTTACAAAGAATGGGGAATTGTAGTTGAATGCGAAC
CAGTGACAGACGGAAGTTATTCATCTGAGTATTATTATGGTCCTTACTACTATCAGTCTGGGTATAGTGGTAGATACTTT
TATCGAAATAGTAATAGTAGCTATCAACCTGTTCCTAGTAATGCAGGTATTCTCCAAAGTCCTTCGGGAAAGTCTACAAC
TTCTGTTGGTACGGTTAATAGAGGTGGTTTTGGTAGTAGAGGTGGTAGAGGTAGTGGTAGCAGTTTGGGTGGTAGAGGCG
GTGGCAAAGGTTGA

Upstream 100 bases:

>100_bases
TTTATGTTAAGCTTTTGGAAAAATGAAAAAAATGAACATCAGTATTGAAAGCCGGATACTAGAGGCTGTCGGTAGTGATA
ACTGATAACGGATAACTGAA

Downstream 100 bases:

>100_bases
GCAAACCCCAAATTAAAATTTCAAAATAAAACAGCAAATGAAACGCATAAATATTGAACCTCGTGCTAACTGGCAGCAGA
AATGTGAAGCGGTTGGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTEPRKIKRSIVITLVLISSISLIACASRRYRREVYRSLEDCYKEWGIVVECEPVTDGSYSSEYYYGPYYYQSGYSGRYF
YRNSNSSYQPVPSNAGILQSPSGKSTTSVGTVNRGGFGSRGGRGSGSSLGGRGGGKG

Sequences:

>Translated_137_residues
MTEPRKIKRSIVITLVLISSISLIACASRRYRREVYRSLEDCYKEWGIVVECEPVTDGSYSSEYYYGPYYYQSGYSGRYF
YRNSNSSYQPVPSNAGILQSPSGKSTTSVGTVNRGGFGSRGGRGSGSSLGGRGGGKG
>Mature_136_residues
TEPRKIKRSIVITLVLISSISLIACASRRYRREVYRSLEDCYKEWGIVVECEPVTDGSYSSEYYYGPYYYQSGYSGRYFY
RNSNSSYQPVPSNAGILQSPSGKSTTSVGTVNRGGFGSRGGRGSGSSLGGRGGGKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14950; Mature: 14819

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPRKIKRSIVITLVLISSISLIACASRRYRREVYRSLEDCYKEWGIVVECEPVTDGSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
SSEYYYGPYYYQSGYSGRYFYRNSNSSYQPVPSNAGILQSPSGKSTTSVGTVNRGGFGSR
CCCEEECCEEECCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
GGRGSGSSLGGRGGGKG
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPRKIKRSIVITLVLISSISLIACASRRYRREVYRSLEDCYKEWGIVVECEPVTDGSY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
SSEYYYGPYYYQSGYSGRYFYRNSNSSYQPVPSNAGILQSPSGKSTTSVGTVNRGGFGSR
CCCEEECCEEECCCCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
GGRGSGSSLGGRGGGKG
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA