The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475523

Identifier: 113475523

GI number: 113475523

Start: 2838325

End: 2839446

Strand: Direct

Name: 113475523

Synonym: Tery_1855

Alternate gene names: NA

Gene position: 2838325-2839446 (Clockwise)

Preceding gene: 113475518

Following gene: 113475525

Centisome position: 36.62

GC content: 33.33

Gene sequence:

>1122_bases
ATGGAACTTTGGAATATTCCTGCTATTGACCAACACGCTCATAATTTGTTACAACCAAAAGCGATCGCTCATTATCCTTA
TGCTGCTGCTTTTACCGAAGCCCATCATACCGATATTATTAATTACCATAGCTGTAATACCCTATTTTATCGTCGAAGTT
TACGGGATATGGCAGACTTATTAAAATGTGAACCGCAAGAATCAGAAATATTAGCAAAACGAGATAATTTAGGGTTAGAA
AATCTAACCAAAACTTGTTTTAACGCAGCCAACCTAGAGACTATTTTATTAGATGATGGTTTTCTCCCAGAAGAAATTTT
ACCTTGGCAATGGCATCAACAATTTGTAGGTGTAAAAAGATTATTAAGAATCGAAAATCTCGCCCAAAATCTAATTCCTC
AAGTAAATAGTTTTGGCGAATTTTTGGAAAGATTTAGAGTAGAAATTGACCCCCCGTCCCAAGAAGTAGTGGGTTTTAAA
AGTATTGCAGCCTATCGCACAGGTTTAGAGATTCAACCAGTCAATATAGAATTAGCAAAATCTCAATTTAATACTATTAA
AAAAAATTCAGGAGAAAAATTACCACGTCTCAATCATAAATCTTTAATTGACTTTTTAATAATCCAGACATTGGAAATAG
CTGCAAAATATAAAATGCCAATACAATTTCACACAGGATTTGGCGATCCAGACTTAGATTTACGTCAATCAAATCCTCTA
CATTTGCGATTTTTATTAGAAGATAATCGCTTTCAAAATACTCCCATTATTTTATTACATGCTTCCTATCCTTATAGCCG
TGAAGCAGGTTATTTAGCATCAGTTTATCCTAATGTTTATATTAGTTTTGGGTTAGCTATACCTTCCTTAAGTATTGCTG
GAATGAAACATGTAGTCAGACAATTAATGGATGTAGCACCTATTAGTAAATTGATGTATTCTTCAGATGCTCATTTGATT
CCTGACCTGTATTATTTAGGTGCTAAATGGGGGCGAAAAATTTTGGCATACGTGTTAGAGGAATCAGTCAAAGATGGAGA
TTTAACTATTAATGAAGCTGAGGAAATAGCTGTAGATGTTCTTAGAAAAAATGCTACTGATATTTATCAATTAGATATGT
AA

Upstream 100 bases:

>100_bases
TAATTCAATAGCTAAATATTTACCTACTTTTTTGGTTTCCTGGTATCTATTATTATTAGTTATAATCCCAAAATATTGTT
CATTAAAAATATAAATAAAA

Downstream 100 bases:

>100_bases
TAATATGATGCATCATTTATTCTAATTATTCTTATTTTTGTCACGACAATGTTAGCGAGAGTCTCTTGCTCCCTTATTGA
ATTGATAATGGATAGTTACC

Product: amidohydrolase 2

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MELWNIPAIDQHAHNLLQPKAIAHYPYAAAFTEAHHTDIINYHSCNTLFYRRSLRDMADLLKCEPQESEILAKRDNLGLE
NLTKTCFNAANLETILLDDGFLPEEILPWQWHQQFVGVKRLLRIENLAQNLIPQVNSFGEFLERFRVEIDPPSQEVVGFK
SIAAYRTGLEIQPVNIELAKSQFNTIKKNSGEKLPRLNHKSLIDFLIIQTLEIAAKYKMPIQFHTGFGDPDLDLRQSNPL
HLRFLLEDNRFQNTPIILLHASYPYSREAGYLASVYPNVYISFGLAIPSLSIAGMKHVVRQLMDVAPISKLMYSSDAHLI
PDLYYLGAKWGRKILAYVLEESVKDGDLTINEAEEIAVDVLRKNATDIYQLDM

Sequences:

>Translated_373_residues
MELWNIPAIDQHAHNLLQPKAIAHYPYAAAFTEAHHTDIINYHSCNTLFYRRSLRDMADLLKCEPQESEILAKRDNLGLE
NLTKTCFNAANLETILLDDGFLPEEILPWQWHQQFVGVKRLLRIENLAQNLIPQVNSFGEFLERFRVEIDPPSQEVVGFK
SIAAYRTGLEIQPVNIELAKSQFNTIKKNSGEKLPRLNHKSLIDFLIIQTLEIAAKYKMPIQFHTGFGDPDLDLRQSNPL
HLRFLLEDNRFQNTPIILLHASYPYSREAGYLASVYPNVYISFGLAIPSLSIAGMKHVVRQLMDVAPISKLMYSSDAHLI
PDLYYLGAKWGRKILAYVLEESVKDGDLTINEAEEIAVDVLRKNATDIYQLDM
>Mature_373_residues
MELWNIPAIDQHAHNLLQPKAIAHYPYAAAFTEAHHTDIINYHSCNTLFYRRSLRDMADLLKCEPQESEILAKRDNLGLE
NLTKTCFNAANLETILLDDGFLPEEILPWQWHQQFVGVKRLLRIENLAQNLIPQVNSFGEFLERFRVEIDPPSQEVVGFK
SIAAYRTGLEIQPVNIELAKSQFNTIKKNSGEKLPRLNHKSLIDFLIIQTLEIAAKYKMPIQFHTGFGDPDLDLRQSNPL
HLRFLLEDNRFQNTPIILLHASYPYSREAGYLASVYPNVYISFGLAIPSLSIAGMKHVVRQLMDVAPISKLMYSSDAHLI
PDLYYLGAKWGRKILAYVLEESVKDGDLTINEAEEIAVDVLRKNATDIYQLDM

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42675; Mature: 42675

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELWNIPAIDQHAHNLLQPKAIAHYPYAAAFTEAHHTDIINYHSCNTLFYRRSLRDMADL
CCCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
LKCEPQESEILAKRDNLGLENLTKTCFNAANLETILLDDGFLPEEILPWQWHQQFVGVKR
HHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCCHHHHHHHHHHHH
LLRIENLAQNLIPQVNSFGEFLERFRVEIDPPSQEVVGFKSIAAYRTGLEIQPVNIELAK
HHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHCCCEEEECCEEEHH
SQFNTIKKNSGEKLPRLNHKSLIDFLIIQTLEIAAKYKMPIQFHTGFGDPDLDLRQSNPL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCE
HLRFLLEDNRFQNTPIILLHASYPYSREAGYLASVYPNVYISFGLAIPSLSIAGMKHVVR
EEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECHHHCCHHHHHHHHHHH
QLMDVAPISKLMYSSDAHLIPDLYYLGAKWGRKILAYVLEESVKDGDLTINEAEEIAVDV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
LRKNATDIYQLDM
HHCCCCCEEEECC
>Mature Secondary Structure
MELWNIPAIDQHAHNLLQPKAIAHYPYAAAFTEAHHTDIINYHSCNTLFYRRSLRDMADL
CCCCCCCCHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHH
LKCEPQESEILAKRDNLGLENLTKTCFNAANLETILLDDGFLPEEILPWQWHQQFVGVKR
HHCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCHHCCCHHHHHHHHHHHH
LLRIENLAQNLIPQVNSFGEFLERFRVEIDPPSQEVVGFKSIAAYRTGLEIQPVNIELAK
HHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCHHHHHHHHHHHHHHCCCEEEECCEEEHH
SQFNTIKKNSGEKLPRLNHKSLIDFLIIQTLEIAAKYKMPIQFHTGFGDPDLDLRQSNPL
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCE
HLRFLLEDNRFQNTPIILLHASYPYSREAGYLASVYPNVYISFGLAIPSLSIAGMKHVVR
EEEEEEECCCCCCCCEEEEECCCCCCCCCCCEEEECCCEEEEECHHHCCHHHHHHHHHHH
QLMDVAPISKLMYSSDAHLIPDLYYLGAKWGRKILAYVLEESVKDGDLTINEAEEIAVDV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHH
LRKNATDIYQLDM
HHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA