| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is ilvH [H]
Identifier: 113475518
GI number: 113475518
Start: 2834594
End: 2835112
Strand: Direct
Name: ilvH [H]
Synonym: Tery_1850
Alternate gene names: 113475518
Gene position: 2834594-2835112 (Clockwise)
Preceding gene: 113475515
Following gene: 113475523
Centisome position: 36.57
GC content: 39.31
Gene sequence:
>519_bases ATGAAACACACTCTTTCTGTATTAGTTGAAGACGAAGCGGGAGTTTTAACCCGTATTGCTGGTTTATTTGCCCGTCGTGG CTTTAATATTGAAAGCCTAGCAGTTGGGCCAGCAGAACAAACCGGTGTGTCTCGAATTACAATGGTAGTACCTGGGGATA ATGGAATTATTGAACAGTTAACCAAGCAACTATATAAGTTGGTTAATGTTTTGAAAGTACACGATATTACAGCTGCTCCC TGTGTAGAACGAGAATTAATGTTACTCAAGATTAATGCTACTACAAGTATGCGCTCAGAAGTGATAGAGATCGCAACTAT TTTTCGGGCGCGAGTAGTAGACGTAGGAGAGGACTCATTAACTATTGAAGTAGTGGGAGACCCAGGAAAAATGGTAGCTA TTGTCCAAATGCTTTCTAAATACGGTATTCGTGAAATTGCGAGAACAGGAAAAATAGCTTTAACTCGTGAGTCTGGTGTT AATACTGAATTTCTTAAACTTCAAACTTCAGAGGTATAA
Upstream 100 bases:
>100_bases CCCATTCAATAAAAATTGTTTCTGAAATTATTACCTGATCTAATTCATATTTTAGTATAAGATAACTAAATATAAAATAC ATTTCTACTGAATTTAGATA
Downstream 100 bases:
>100_bases ATTAGCAAAAAGTTAATTATGTAGAATAAGAAATATAGCAATCCTAAGTAGGTTGCGGCAAAATTTCATACTGAAAAAGT TTTGGGAAATTGAATATTTG
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV NTEFLKLQTSEV
Sequences:
>Translated_172_residues MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV NTEFLKLQTSEV >Mature_172_residues MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV NTEFLKLQTSEV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=157, Percent_Identity=42.6751592356688, Blast_Score=129, Evalue=1e-31, Organism=Saccharomyces cerevisiae, GI6319837, Length=204, Percent_Identity=28.921568627451, Blast_Score=96, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18764; Mature: 18764
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQL CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHH TKQLYKLVNVLKVHDITAAPCVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSL HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEE TIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGVNTEFLKLQTSEV EEEEECCCCHHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCEEEEEEEECCC >Mature Secondary Structure MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQL CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHH TKQLYKLVNVLKVHDITAAPCVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSL HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEE TIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGVNTEFLKLQTSEV EEEEECCCCHHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]