Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is ilvH [H]

Identifier: 113475518

GI number: 113475518

Start: 2834594

End: 2835112

Strand: Direct

Name: ilvH [H]

Synonym: Tery_1850

Alternate gene names: 113475518

Gene position: 2834594-2835112 (Clockwise)

Preceding gene: 113475515

Following gene: 113475523

Centisome position: 36.57

GC content: 39.31

Gene sequence:

>519_bases
ATGAAACACACTCTTTCTGTATTAGTTGAAGACGAAGCGGGAGTTTTAACCCGTATTGCTGGTTTATTTGCCCGTCGTGG
CTTTAATATTGAAAGCCTAGCAGTTGGGCCAGCAGAACAAACCGGTGTGTCTCGAATTACAATGGTAGTACCTGGGGATA
ATGGAATTATTGAACAGTTAACCAAGCAACTATATAAGTTGGTTAATGTTTTGAAAGTACACGATATTACAGCTGCTCCC
TGTGTAGAACGAGAATTAATGTTACTCAAGATTAATGCTACTACAAGTATGCGCTCAGAAGTGATAGAGATCGCAACTAT
TTTTCGGGCGCGAGTAGTAGACGTAGGAGAGGACTCATTAACTATTGAAGTAGTGGGAGACCCAGGAAAAATGGTAGCTA
TTGTCCAAATGCTTTCTAAATACGGTATTCGTGAAATTGCGAGAACAGGAAAAATAGCTTTAACTCGTGAGTCTGGTGTT
AATACTGAATTTCTTAAACTTCAAACTTCAGAGGTATAA

Upstream 100 bases:

>100_bases
CCCATTCAATAAAAATTGTTTCTGAAATTATTACCTGATCTAATTCATATTTTAGTATAAGATAACTAAATATAAAATAC
ATTTCTACTGAATTTAGATA

Downstream 100 bases:

>100_bases
ATTAGCAAAAAGTTAATTATGTAGAATAAGAAATATAGCAATCCTAAGTAGGTTGCGGCAAAATTTCATACTGAAAAAGT
TTTGGGAAATTGAATATTTG

Product: acetolactate synthase 3 regulatory subunit

Products: NA

Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP
CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV
NTEFLKLQTSEV

Sequences:

>Translated_172_residues
MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP
CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV
NTEFLKLQTSEV
>Mature_172_residues
MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQLTKQLYKLVNVLKVHDITAAP
CVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSLTIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGV
NTEFLKLQTSEV

Specific function: Valine and isoleucine biosynthesis; first step. [C]

COG id: COG0440

COG function: function code E; Acetolactate synthase, small (regulatory) subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Escherichia coli, GI1786266, Length=157, Percent_Identity=42.6751592356688, Blast_Score=129, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6319837, Length=204, Percent_Identity=28.921568627451, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004789
- InterPro:   IPR019455
- InterPro:   IPR002912 [H]

Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]

EC number: =2.2.1.6 [H]

Molecular weight: Translated: 18764; Mature: 18764

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQL
CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHH
TKQLYKLVNVLKVHDITAAPCVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEE
TIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGVNTEFLKLQTSEV
EEEEECCCCHHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGPAEQTGVSRITMVVPGDNGIIEQL
CCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEEECCCCHHHHH
TKQLYKLVNVLKVHDITAAPCVERELMLLKINATTSMRSEVIEIATIFRARVVDVGEDSL
HHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEE
TIEVVGDPGKMVAIVQMLSKYGIREIARTGKIALTRESGVNTEFLKLQTSEV
EEEEECCCCHHHHHHHHHHHHCHHHHHHCCCEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]