| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475515
Identifier: 113475515
GI number: 113475515
Start: 2830920
End: 2831507
Strand: Direct
Name: 113475515
Synonym: Tery_1847
Alternate gene names: NA
Gene position: 2830920-2831507 (Clockwise)
Preceding gene: 113475514
Following gene: 113475518
Centisome position: 36.53
GC content: 30.61
Gene sequence:
>588_bases ATGGTAAATAAAATTTCTGCTGAAGAATTTTATGATGATTTTGCTCCTAACTATGATGATGTATTAAAAGACCCCAAGTG TAATGCACAGCACGTCTATGAGGCAGCTAAAATATTTCATCAATATAATTACCATCAAGGTAGTATTTTAGATATAGGTT GTGGAACAGGCTTTCTAAGTGAATTATTAGAGGGAAATTTTGAATATACAGGTATTGATGTTTCGGCTAATATGCTGGAA TATTCAGCTAAAAGAGGTTATCAAACTATCCATAAACCAATAGAAACGGCTTTACCTAAAATTGATACTCAATCCTACGA TTTTGTTTTTTGTCTGGGAGCATTATTATTTGTTGAAGATGCTCAAAAAGCTATAGAGCATATTTATCGAATTGCTCGTA AAGCTATTTTAATAAGTCTTGATGAGACAACCGAGGAATATATCAAAAATTTTGCTGTGCTAGTTTATGACCATTCAAAA ATTACAATTAAAAATGCCATTGAAGATTATTTGATTATAGGTTGGACTTCTACAACTACAGGTATTTCTATCCGAACTCG TATGATTTATATTGAACAAAAAAATTAA
Upstream 100 bases:
>100_bases AAAAACTAAGATAATGGTTGACTAAGATTTAATATTTAATGTTGCCTATTGATCGTATTACATGGAAGAGTAAACATAAG TAAATCTTGAACTATAAATT
Downstream 100 bases:
>100_bases GGTAACTGTAAATTAGTAGTGATGATTTCTAGTTGATATCCTAAGAGTGAGAAAGGTATACTGAAAGCATCACTACTTCT AAAAATTGTCTTTTGTTAAA
Product: type 11 methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN
Sequences:
>Translated_195_residues MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN >Mature_195_residues MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLSELLEGNFEYTGIDVSANMLE YSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVEDAQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSK ITIKNAIEDYLIIGWTSTTTGISIRTRMIYIEQKN
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22334; Mature: 22334
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLS CCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH ELLEGNFEYTGIDVSANMLEYSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVED HHHHCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSKITIKNAIEDYLIIGWTSTTT HHHHHHHHHHHHHHHHEEEECHHHHHHHHCEEEEEEECCEEEEHHCCCCEEEEEECCCCC GISIRTRMIYIEQKN CEEEEEEEEEEEECC >Mature Secondary Structure MVNKISAEEFYDDFAPNYDDVLKDPKCNAQHVYEAAKIFHQYNYHQGSILDIGCGTGFLS CCCCCCHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHH ELLEGNFEYTGIDVSANMLEYSAKRGYQTIHKPIETALPKIDTQSYDFVFCLGALLFVED HHHHCCCEEEEEECHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH AQKAIEHIYRIARKAILISLDETTEEYIKNFAVLVYDHSKITIKNAIEDYLIIGWTSTTT HHHHHHHHHHHHHHHHEEEECHHHHHHHHCEEEEEEECCEEEEHHCCCCEEEEEECCCCC GISIRTRMIYIEQKN CEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA