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The map label for this gene is bioD [H]

Identifier: 113475510

GI number: 113475510

Start: 2825713

End: 2826447

Strand: Direct

Name: bioD [H]

Synonym: Tery_1842

Alternate gene names: 113475510

Gene position: 2825713-2826447 (Clockwise)

Preceding gene: 113475508

Following gene: 113475511

Centisome position: 36.46

GC content: 39.05

Gene sequence:

>735_bases
TTGAATAATTATCAATCAAATCTTCCGATAAACACCTTGAAAGAACTTTTAATTACTGGAACTGATACTGACGCAGGCAA
AACAATATTGACCATCGCTCTTGCTGCTTACTGGCAAACTTACTACAAAAACCAGAAGTTAGCCCTGTTTAAACCTATTC
AAACTGGTATTGGCGATCGCGAACTCTACACCCAACTATTTTCCCTCGAACAATCTCTTGACGAAATCAACCCTTTATGG
TATAAGACACCAGTTGCACCACCCGTAGCATCAGAAAAAGAAGGTCGTCTAATACAATTAGACAAAATATGGTCAACTTT
TACAACCTTGCGAGAGCAAAAAGATTTTGTATTAGTTGAAGGTTTAGGAGGGCTGGGTTCCCCTGTAACTAAGGAACTCA
CCGTAGCAGATATAGCTAGAGATTGGGATTTACCCACTATTTTAGTAGTACCAATTAAGTTAGGAGCGATCGCTCAAACT
GTAGCAAACGTTGCCCTAGCCCGTCAGATGAAAGTTAACCTCCGAGGCATTATCCTCAACTGTATCAAACCCTGCTCAGA
ACAAGAAATAGCTGACTGGACTCCAGTTGACTTAATTGAATCCTTAACTCAAATGCAAGTTTGCGGTATTATACCACACT
TAAAAGACATTACCGACTTAGATAAATTAGCAAAAGCAGCTTCTAACCTAGACTTAGAGAAATTTCTGCCAGTAGTGTCA
AAAGTTAAAAGTTAA

Upstream 100 bases:

>100_bases
TGATCATATTTAGAATTTAGAAGTTAAAAGTTAGAAGTTTAGACCTTAATTTTAACCTTTCATCCAGACTACTGCCGGAG
TTAACCAAAATCCAATAATA

Downstream 100 bases:

>100_bases
AAGTCAAAAGCCAGAAACTAAAAGTTAAAAGTTAAAAGTTAAATTTTTAATTACTAAGAACTGACCCACAACCACCATAT
CTATTAGGGACATTAGGAAT

Product: dithiobiotin synthetase

Products: NA

Alternate protein names: DTB synthetase; DTBS; Dethiobiotin synthase [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNNYQSNLPINTLKELLITGTDTDAGKTILTIALAAYWQTYYKNQKLALFKPIQTGIGDRELYTQLFSLEQSLDEINPLW
YKTPVAPPVASEKEGRLIQLDKIWSTFTTLREQKDFVLVEGLGGLGSPVTKELTVADIARDWDLPTILVVPIKLGAIAQT
VANVALARQMKVNLRGIILNCIKPCSEQEIADWTPVDLIESLTQMQVCGIIPHLKDITDLDKLAKAASNLDLEKFLPVVS
KVKS

Sequences:

>Translated_244_residues
MNNYQSNLPINTLKELLITGTDTDAGKTILTIALAAYWQTYYKNQKLALFKPIQTGIGDRELYTQLFSLEQSLDEINPLW
YKTPVAPPVASEKEGRLIQLDKIWSTFTTLREQKDFVLVEGLGGLGSPVTKELTVADIARDWDLPTILVVPIKLGAIAQT
VANVALARQMKVNLRGIILNCIKPCSEQEIADWTPVDLIESLTQMQVCGIIPHLKDITDLDKLAKAASNLDLEKFLPVVS
KVKS
>Mature_244_residues
MNNYQSNLPINTLKELLITGTDTDAGKTILTIALAAYWQTYYKNQKLALFKPIQTGIGDRELYTQLFSLEQSLDEINPLW
YKTPVAPPVASEKEGRLIQLDKIWSTFTTLREQKDFVLVEGLGGLGSPVTKELTVADIARDWDLPTILVVPIKLGAIAQT
VANVALARQMKVNLRGIILNCIKPCSEQEIADWTPVDLIESLTQMQVCGIIPHLKDITDLDKLAKAASNLDLEKFLPVVS
KVKS

Specific function: Bioconversion of pimelate into dethiobiotin. [C]

COG id: COG0132

COG function: function code H; Dethiobiotin synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dethiobiotin synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1786995, Length=217, Percent_Identity=29.9539170506912, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004472 [H]

Pfam domain/function: NA

EC number: =6.3.3.3 [H]

Molecular weight: Translated: 27105; Mature: 27105

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYQSNLPINTLKELLITGTDTDAGKTILTIALAAYWQTYYKNQKLALFKPIQTGIGDR
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHH
ELYTQLFSLEQSLDEINPLWYKTPVAPPVASEKEGRLIQLDKIWSTFTTLREQKDFVLVE
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEE
GLGGLGSPVTKELTVADIARDWDLPTILVVPIKLGAIAQTVANVALARQMKVNLRGIILN
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIKPCSEQEIADWTPVDLIESLTQMQVCGIIPHLKDITDLDKLAKAASNLDLEKFLPVVS
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KVKS
HHCC
>Mature Secondary Structure
MNNYQSNLPINTLKELLITGTDTDAGKTILTIALAAYWQTYYKNQKLALFKPIQTGIGDR
CCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHCCCHH
ELYTQLFSLEQSLDEINPLWYKTPVAPPVASEKEGRLIQLDKIWSTFTTLREQKDFVLVE
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCCEEEEE
GLGGLGSPVTKELTVADIARDWDLPTILVVPIKLGAIAQTVANVALARQMKVNLRGIILN
CCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CIKPCSEQEIADWTPVDLIESLTQMQVCGIIPHLKDITDLDKLAKAASNLDLEKFLPVVS
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
KVKS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA