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The map label for this gene is spoVD [H]

Identifier: 113475508

GI number: 113475508

Start: 2819234

End: 2821120

Strand: Direct

Name: spoVD [H]

Synonym: Tery_1840

Alternate gene names: 113475508

Gene position: 2819234-2821120 (Clockwise)

Preceding gene: 113475507

Following gene: 113475510

Centisome position: 36.38

GC content: 37.84

Gene sequence:

>1887_bases
ATGGCTTCTTCTGACTCTTCTTCAAATTCTAAACTTCGTCGTAGGTATTTAAAGCGCAAACAAGCGGAAAAATTTAGTTC
TCATCTTAAAAATCAAAGATATCAAGATGAAATATATTCTGTTAGAAATAATGATCACAAATTAGCTTCAACTCCCCCTG
ATGAAAACTCTGAAAAATGTAGAACATCTAGGCTTTACCAAGTCTGGGTGCTTCTGATGTTGGGCTTAGTAGTATTAATA
ACTAACCTATTTCGTTTACAAATTTTGCAAGGAAAAGAATTACAAAAGCTAGCTCAAAAACAGCATACCATAGAATCAAA
TCCTTTTATTCCCAGACGACCAATAGTTGATAGAAATGGGAATCTTTTAGCAATTGATCAAATAGCATATACTCTCTATG
CTCACCCTAAAATTTTTAATCGCCAAAAACAAGAAGTTGCTAATAAGTTGTCAACTGTTCTAGAAGGAGCAAGTTTAAAG
AAAAATCTAACTTCTAATGATTTACTTCAAATGTTTCATCAAAGAGAGACAGGTATAAAAATTGTTGAGTATATACCTCA
AGAAACTGCTAATAAAATTACTGATCTATTTATTGATGGCTTAGAATTAATTCAACACTCACAACGGCTCTATCCTCAGA
AGGAATTAGTGGCGGAAATTGTAGGATATGTAGATGGAGAAAGCAAAGGTCAAGCTGGAATTGAGTATAGCCAACAAAAT
CTTTTAGAGCGCTCTATGGGAGCAATCAAATTTCGGCGCTTAATTAAAGGTGTTTTGGTACCTGATAAACTAACTAGGGG
TTTTTTGCAGTTAGATGACCTTTCCCTTCATTTAACTATTGATTCTCCGTTGCAACGATCAGTACGAGCTATTTTACAAA
AACAGTTAGAAAAGTATGACGCCAAGCGGGGTACTGTCATAGTGATGGATGCTACTGATGGTTCTATATTATCTTTGGTC
TCGGAACCTTCTTATAATCCTAATAAATACTATAATTATGATGTGACGTTGTTCAAAAATTGGGCTGTAACGGATGTTTA
TGAACCTGGTTCTACTTTTAAACCAATAAATGTGGCTTTGGCTTTGGAGGTAGGAGCAATTGAAGAAGATAGTGTATTTT
ATGATACAGGAAGGATCAGGTTTGATCGTTGGTCTATATTTAATTCTGGTGGTGGCGGCGGCGCCCGAACTGTGACTCAA
ATTATTCAACATTCTAGTAATATCGGTATGGTTAAAATTGTTGAAGAAATGCCGCGCGCTGTTTTTTATGATGGTCTCAA
ACGTTTGGAACTAGATAGTATTACTGGTACGGATTTACCTTTTGAGGCTGCTAATATTTTGAAGGGTAGAAACCAGTTTT
TAATGGTGCCGGTGGAAGCAGCGACTACTGCTTTCGGTCAGGGGTTCTCTCTGACTCCTTTGAAGCTAGCACAGTTACAT
GCGGCTTTGGCAAATGGGGGAAAGTTGGTGACGCCTCATGTTGTTCGTGGATTATTTGATAGTAAGAAGCAACCATATTG
GCAGTTGCCAATGCGGGAACCTAAACAGGTTTTTTCTGTTGATACGACGAGAAAAGTTTTGGCAATGATGGAAAAGGTGG
TTGAGAGTGGTACTGGTAAAAGGGCTAGACTACGTGGATATCGCATTGCTGGCAAAACTGGTACGGCGCAAAAGGCTTCT
GATACTGGAGGTTATTCTGATGATGCTCGAATTACTAGTTTTGTGGGTATTTTGCCAATGGAGTCTCCTCGTTATGTGGT
TTTGGCTGTTATTGATGAGCCTATTAAGGGTACTGGGGGAAAGGTTGCTGCTCCTGTTGTTAAGTCGGTGATTAAGTCTT
TGATTAATATTGAGCAAATTCCTCCTTCTTCTATTAGGTCTAAGTGA

Upstream 100 bases:

>100_bases
GATCAAAACTACTAACTATCTTTGCTCTCTACTACTAAACTAGCAAACCTGAAACTACTAAATTAACTTTTATGATCCCC
TATTATTATAAATAAAACAA

Downstream 100 bases:

>100_bases
GGTTAAGGGTTGAATGTTAAGGTTTTTTAAAGGCTGTAGTAAAACTGCTATGTATTGAGTTATTATGATTACATTGATAT
AAGTAATTCAAAAAACGAAC

Product: peptidoglycan glycosyltransferase

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MASSDSSSNSKLRRRYLKRKQAEKFSSHLKNQRYQDEIYSVRNNDHKLASTPPDENSEKCRTSRLYQVWVLLMLGLVVLI
TNLFRLQILQGKELQKLAQKQHTIESNPFIPRRPIVDRNGNLLAIDQIAYTLYAHPKIFNRQKQEVANKLSTVLEGASLK
KNLTSNDLLQMFHQRETGIKIVEYIPQETANKITDLFIDGLELIQHSQRLYPQKELVAEIVGYVDGESKGQAGIEYSQQN
LLERSMGAIKFRRLIKGVLVPDKLTRGFLQLDDLSLHLTIDSPLQRSVRAILQKQLEKYDAKRGTVIVMDATDGSILSLV
SEPSYNPNKYYNYDVTLFKNWAVTDVYEPGSTFKPINVALALEVGAIEEDSVFYDTGRIRFDRWSIFNSGGGGGARTVTQ
IIQHSSNIGMVKIVEEMPRAVFYDGLKRLELDSITGTDLPFEAANILKGRNQFLMVPVEAATTAFGQGFSLTPLKLAQLH
AALANGGKLVTPHVVRGLFDSKKQPYWQLPMREPKQVFSVDTTRKVLAMMEKVVESGTGKRARLRGYRIAGKTGTAQKAS
DTGGYSDDARITSFVGILPMESPRYVVLAVIDEPIKGTGGKVAAPVVKSVIKSLINIEQIPPSSIRSK

Sequences:

>Translated_628_residues
MASSDSSSNSKLRRRYLKRKQAEKFSSHLKNQRYQDEIYSVRNNDHKLASTPPDENSEKCRTSRLYQVWVLLMLGLVVLI
TNLFRLQILQGKELQKLAQKQHTIESNPFIPRRPIVDRNGNLLAIDQIAYTLYAHPKIFNRQKQEVANKLSTVLEGASLK
KNLTSNDLLQMFHQRETGIKIVEYIPQETANKITDLFIDGLELIQHSQRLYPQKELVAEIVGYVDGESKGQAGIEYSQQN
LLERSMGAIKFRRLIKGVLVPDKLTRGFLQLDDLSLHLTIDSPLQRSVRAILQKQLEKYDAKRGTVIVMDATDGSILSLV
SEPSYNPNKYYNYDVTLFKNWAVTDVYEPGSTFKPINVALALEVGAIEEDSVFYDTGRIRFDRWSIFNSGGGGGARTVTQ
IIQHSSNIGMVKIVEEMPRAVFYDGLKRLELDSITGTDLPFEAANILKGRNQFLMVPVEAATTAFGQGFSLTPLKLAQLH
AALANGGKLVTPHVVRGLFDSKKQPYWQLPMREPKQVFSVDTTRKVLAMMEKVVESGTGKRARLRGYRIAGKTGTAQKAS
DTGGYSDDARITSFVGILPMESPRYVVLAVIDEPIKGTGGKVAAPVVKSVIKSLINIEQIPPSSIRSK
>Mature_627_residues
ASSDSSSNSKLRRRYLKRKQAEKFSSHLKNQRYQDEIYSVRNNDHKLASTPPDENSEKCRTSRLYQVWVLLMLGLVVLIT
NLFRLQILQGKELQKLAQKQHTIESNPFIPRRPIVDRNGNLLAIDQIAYTLYAHPKIFNRQKQEVANKLSTVLEGASLKK
NLTSNDLLQMFHQRETGIKIVEYIPQETANKITDLFIDGLELIQHSQRLYPQKELVAEIVGYVDGESKGQAGIEYSQQNL
LERSMGAIKFRRLIKGVLVPDKLTRGFLQLDDLSLHLTIDSPLQRSVRAILQKQLEKYDAKRGTVIVMDATDGSILSLVS
EPSYNPNKYYNYDVTLFKNWAVTDVYEPGSTFKPINVALALEVGAIEEDSVFYDTGRIRFDRWSIFNSGGGGGARTVTQI
IQHSSNIGMVKIVEEMPRAVFYDGLKRLELDSITGTDLPFEAANILKGRNQFLMVPVEAATTAFGQGFSLTPLKLAQLHA
ALANGGKLVTPHVVRGLFDSKKQPYWQLPMREPKQVFSVDTTRKVLAMMEKVVESGTGKRARLRGYRIAGKTGTAQKASD
TGGYSDDARITSFVGILPMESPRYVVLAVIDEPIKGTGGKVAAPVVKSVIKSLINIEQIPPSSIRSK

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

Organism=Escherichia coli, GI1786272, Length=571, Percent_Identity=28.8966725043783, Blast_Score=196, Evalue=3e-51,
Organism=Escherichia coli, GI1786854, Length=630, Percent_Identity=24.1269841269841, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 70330; Mature: 70199

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSDSSSNSKLRRRYLKRKQAEKFSSHLKNQRYQDEIYSVRNNDHKLASTPPDENSEKC
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RTSRLYQVWVLLMLGLVVLITNLFRLQILQGKELQKLAQKQHTIESNPFIPRRPIVDRNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NLLAIDQIAYTLYAHPKIFNRQKQEVANKLSTVLEGASLKKNLTSNDLLQMFHQRETGIK
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCH
IVEYIPQETANKITDLFIDGLELIQHSQRLYPQKELVAEIVGYVDGESKGQAGIEYSQQN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLERSMGAIKFRRLIKGVLVPDKLTRGFLQLDDLSLHLTIDSPLQRSVRAILQKQLEKYD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECEEEEEEECCHHHHHHHHHHHHHHHHHC
AKRGTVIVMDATDGSILSLVSEPSYNPNKYYNYDVTLFKNWAVTDVYEPGSTFKPINVAL
CCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEE
ALEVGAIEEDSVFYDTGRIRFDRWSIFNSGGGGGARTVTQIIQHSSNIGMVKIVEEMPRA
EEEECCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VFYDGLKRLELDSITGTDLPFEAANILKGRNQFLMVPVEAATTAFGQGFSLTPLKLAQLH
HHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHH
AALANGGKLVTPHVVRGLFDSKKQPYWQLPMREPKQVFSVDTTRKVLAMMEKVVESGTGK
HHHHCCCEEECHHHHHHHHHCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
RARLRGYRIAGKTGTAQKASDTGGYSDDARITSFVGILPMESPRYVVLAVIDEPIKGTGG
EEEECEEEEECCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCEEEEEEECCCCCCCCC
KVAAPVVKSVIKSLINIEQIPPSSIRSK
CCHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
ASSDSSSNSKLRRRYLKRKQAEKFSSHLKNQRYQDEIYSVRNNDHKLASTPPDENSEKC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
RTSRLYQVWVLLMLGLVVLITNLFRLQILQGKELQKLAQKQHTIESNPFIPRRPIVDRNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NLLAIDQIAYTLYAHPKIFNRQKQEVANKLSTVLEGASLKKNLTSNDLLQMFHQRETGIK
CEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHCCCCH
IVEYIPQETANKITDLFIDGLELIQHSQRLYPQKELVAEIVGYVDGESKGQAGIEYSQQN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LLERSMGAIKFRRLIKGVLVPDKLTRGFLQLDDLSLHLTIDSPLQRSVRAILQKQLEKYD
HHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECEEEEEEECCHHHHHHHHHHHHHHHHHC
AKRGTVIVMDATDGSILSLVSEPSYNPNKYYNYDVTLFKNWAVTDVYEPGSTFKPINVAL
CCCCEEEEEECCCCCHHHHHCCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCEEEEE
ALEVGAIEEDSVFYDTGRIRFDRWSIFNSGGGGGARTVTQIIQHSSNIGMVKIVEEMPRA
EEEECCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
VFYDGLKRLELDSITGTDLPFEAANILKGRNQFLMVPVEAATTAFGQGFSLTPLKLAQLH
HHHHHHHHEEECCCCCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCHHHHHHHH
AALANGGKLVTPHVVRGLFDSKKQPYWQLPMREPKQVFSVDTTRKVLAMMEKVVESGTGK
HHHHCCCEEECHHHHHHHHHCCCCCEEECCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
RARLRGYRIAGKTGTAQKASDTGGYSDDARITSFVGILPMESPRYVVLAVIDEPIKGTGG
EEEECEEEEECCCCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCEEEEEEECCCCCCCCC
KVAAPVVKSVIKSLINIEQIPPSSIRSK
CCHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]