| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is qor [H]
Identifier: 113475500
GI number: 113475500
Start: 2798463
End: 2799458
Strand: Direct
Name: qor [H]
Synonym: Tery_1832
Alternate gene names: 113475500
Gene position: 2798463-2799458 (Clockwise)
Preceding gene: 113475499
Following gene: 113475502
Centisome position: 36.11
GC content: 38.15
Gene sequence:
>996_bases ATGAAAGCAGTTGTAATGATATCACCTGGGACACCAGAAGTTTTGCAAGTACAGCAGGTTGCTGATCCTGTAATTGAAAA TGATAGAGAAGTCTTAATCCGTTTAAAAGCTGCCGGAGTCAATCCTATTGATACCAAATTAAGGACTCGTGGCACTCTTT ACCCAGATAAAATGCCAGCTATTTTAGGATGTGATGGAGCGGGTATTGTGGAAGCTATTGGTAAAAATGTACAAAAGTTT CAAGTGGGAGATGAAGTTTATTTTTGTAATAGTGGTATCGGAGCTGCTCCAGGAAATTATGCAGAATTGGCTGTTGTTGA TGAAAGATTTGTCGAGAACAAACCGAGTTCTTTAAGCTTTGTTGAAGCTGCTGCTGCACCCTTAGTTTTAATTACTGCCT GGGAATCTTTGTATGATCGAGGAAAGTTACAAGCTGGTAGAAAAGTCTTGATTCATGGTGGTGCTGGTGGTGTTGGTCAT GTGGCTATACAGTTGGCAAAGTTACAGGGTGCTGAAGTTGCTACTACTATTAGTTCAAAAGAAAAATCAGATTTTGTTAA AAGTTTGGGAACAGATTTAGCAATTTTTAAGAATGAAGATTTTGTGAAAGTTGTTTTAGATTGGACTAATGGGGAAGGGG TAGATTTGGCTTTCGATACTATTGGTGGTAAGGTTTTCTATGATACTATTCCGGCAGTAAAAGTTTATGGAGATTTAGTA ACAATTTTAGAGCCTGATACTAGCTTAGGAAATTTGAAAGTTGCTAGGCAAAGAAATCTGCGAATTGGGTTGGAATTAAT GTTAACTCCAATGACGAAAGGACTGATGGAAGCTCAAGAAGACCAAGCTAAAATTTTGCAGCAATGTAGACGGTTATTTG ACCAAGGAAAGCTGAAGATTCATGTGAATAGAACTTTTGCTCTAGACGACGCCATAGAAGCACATCGAATTTTGGAAGCA GGGTCTATGCTTGGTAAGATTGTTTTGACTATTTAA
Upstream 100 bases:
>100_bases TAAAGACCTATTATTATTTTTCGTCCTCATGCCAAATTTTCTCGATCAGCCTAGTTTATGGGTAAGTCCTAATACTTTTT AATTTCAGGAAAAATCTACT
Downstream 100 bases:
>100_bases TTTTGAATAGGTAGGGATTTTCCATGGAACGGAACTAAATCTTAGGGTTCAAAGACATAAGATATCTTTGCTCTTAGTCT ATAATTCTTAAAAATATTAA
Product: zinc-binding alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA GSMLGKIVLTI
Sequences:
>Translated_331_residues MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA GSMLGKIVLTI >Mature_331_residues MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPAILGCDGAGIVEAIGKNVQKF QVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSFVEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGH VAIQLAKLQGAEVATTISSKEKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKIHVNRTFALDDAIEAHRILEA GSMLGKIVLTI
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=344, Percent_Identity=29.3604651162791, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI22538444, Length=344, Percent_Identity=29.3604651162791, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI194239674, Length=334, Percent_Identity=27.2455089820359, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI13236495, Length=334, Percent_Identity=27.2455089820359, Blast_Score=116, Evalue=3e-26, Organism=Homo sapiens, GI47519420, Length=363, Percent_Identity=30.0275482093664, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI194239676, Length=210, Percent_Identity=35.7142857142857, Blast_Score=111, Evalue=9e-25, Organism=Homo sapiens, GI24308257, Length=354, Percent_Identity=27.4011299435028, Blast_Score=106, Evalue=4e-23, Organism=Homo sapiens, GI28557745, Length=243, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI18379349, Length=322, Percent_Identity=27.3291925465839, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI41872631, Length=320, Percent_Identity=25.9375, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI90669511, Length=256, Percent_Identity=30.46875, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI67078404, Length=223, Percent_Identity=27.3542600896861, Blast_Score=69, Evalue=5e-12, Organism=Homo sapiens, GI67078406, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790485, Length=327, Percent_Identity=28.4403669724771, Blast_Score=119, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17507255, Length=190, Percent_Identity=35.2631578947368, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71987554, Length=243, Percent_Identity=33.7448559670782, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI212642053, Length=241, Percent_Identity=31.1203319502075, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17536829, Length=219, Percent_Identity=29.2237442922374, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6319520, Length=335, Percent_Identity=30.1492537313433, Blast_Score=116, Evalue=6e-27, Organism=Drosophila melanogaster, GI19920632, Length=243, Percent_Identity=26.3374485596708, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221330659, Length=243, Percent_Identity=26.3374485596708, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24581345, Length=229, Percent_Identity=25.3275109170306, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 35755; Mature: 35755
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPA CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCE ILGCDGAGIVEAIGKNVQKFQVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSF EEECCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHH VEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGHVAIQLAKLQGAEVATTISSK HHHHCCCEEEEEEHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEECCCCCEEEEECCCH EKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV HHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCHHHHHCCEE TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKI EEECCCCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE HVNRTFALDDAIEAHRILEAGSMLGKIVLTI EEEEEEECHHHHHHHHHHHHHHHHHEEEEEC >Mature Secondary Structure MKAVVMISPGTPEVLQVQQVADPVIENDREVLIRLKAAGVNPIDTKLRTRGTLYPDKMPA CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCE ILGCDGAGIVEAIGKNVQKFQVGDEVYFCNSGIGAAPGNYAELAVVDERFVENKPSSLSF EEECCCCHHHHHHCCCCEEEECCCEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCHH VEAAAAPLVLITAWESLYDRGKLQAGRKVLIHGGAGGVGHVAIQLAKLQGAEVATTISSK HHHHCCCEEEEEEHHHHHHCCCCCCCCEEEEECCCCCHHHHEEEEECCCCCEEEEECCCH EKSDFVKSLGTDLAIFKNEDFVKVVLDWTNGEGVDLAFDTIGGKVFYDTIPAVKVYGDLV HHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCEEEEEECCCCEEEEECCCHHHHHCCEE TILEPDTSLGNLKVARQRNLRIGLELMLTPMTKGLMEAQEDQAKILQQCRRLFDQGKLKI EEECCCCCCCCEEEEECCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE HVNRTFALDDAIEAHRILEAGSMLGKIVLTI EEEEEEECHHHHHHHHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]