| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475456
Identifier: 113475456
GI number: 113475456
Start: 2726086
End: 2727363
Strand: Direct
Name: 113475456
Synonym: Tery_1785
Alternate gene names: NA
Gene position: 2726086-2727363 (Clockwise)
Preceding gene: 113475455
Following gene: 113475457
Centisome position: 35.17
GC content: 31.92
Gene sequence:
>1278_bases ATGCCACGCAATCAATTTTATCCCGATAAATCTGTTCCTCCAGAAAAATTTGTAGGTAGAACATCTGAACTATCCACGAT TTTTGACAAAATTAATAGTCGCGATCATGTTGCTATTTTTGGTAGTTCTGGTATGGGTAAAACATCTTTGCTTCAATATA TAGAAAACTCTAAATTTTGGGAAGAAAGAGACTTAGATTTTTCAGAAGCTTTGATTGTTTATCACAACTGCGAGCTTTCA GTTATAGATAGTTTTTGGCAAGAAGTCCTCAGAACATTAATAGATAAAGCTACAGGTGATCAAGATTTAGTGAGTAAGAT TAATGCTTTATTAGGGTTGGAGAAAATAGAAATAACAGATATACGGGAGCTTCTCAGAGAGATTGGGAAAAGAGGTAAGT TTTTATTATTATTATTAGATGACTATCATAGAATACTTGGTACACGAGAAGAGTATCCGGAAAACCAGGGAAAAAAATCT AAAAAAGTGCTGACTTTTTTAAGTGAGTTGCGTAACCTAGCAGTTCATAATAGAGAAGGTCAATATTTCTCAACTATTGT TGCTACGTTTCAAAAGTTGCATGAACTAGGTCCAACAATTGTTCCTGGTGGTTCTCCTTGGTATAATCATTATGCCTATC TACCTTTAAAACCTTTTTGTAAAAGCGATATTGAGGGTCATTTTTTTAATCGCGATAGTCATTTTTTCATTTCAGATGCT CCGAAAGAAGAAGTTTTAAAAATGACTGGTGGGTATCCAGCGTTACTTCAGTTTACAGGTTATATATTTTCTCGCTTGGA ACCAGTTAATGTTGATACTCTGAATACAATGTTAAAAAACGATGCTGATAGAATTTTTCAGGATGTCTGGAACAATTTTG AAAAAAATGAGCAAGAAATTTTGCAGTTAATTTTAATTGATAAATATAAGGGTAAATTCAGGGAAATTTCTTATTCTATT GCTGGCATAGAAAAAGAGTTTATTCGCAATATTAGCATATTGAAGAGTCTTGAAGAAAAAGGATTTATCAGTCAGGTTAA ACAAGCAAATAAATATAGTTTTACTTCTTCTTTAATGGAAGATTTTATTGGTGATCAACTTGCAGAAAAAAATGTTTCAA ACGCTAAAGACCGCAAGATAGTGATTAATTTATTTATTATCAAGATTACTCTTGGACTATGGAAGAAAGTTAAAGAAAAA ATACAGCCTGTTACTAAGTTCATATCACCTCTTGCTAAAATCATCGATTTAATCGCTAACAAAATAGAAGGCAAATAA
Upstream 100 bases:
>100_bases GTATGAAATATCTGAAAGATGCCGAAGATTTAGCAATTCTGAAGACTCTGATATAATATGAAATTATAGTCAAGCTAAAA GTAAAATAGTTGATCCAATT
Downstream 100 bases:
>100_bases TAGCAAACGTCTAGTTGGATGTAGTTTTGCAAATGAGAAATTTAAAGGCTTTGATTAAAAATCCCTACACTGTTGGTCGC CCAATTTTTGAACCAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MPRNQFYPDKSVPPEKFVGRTSELSTIFDKINSRDHVAIFGSSGMGKTSLLQYIENSKFWEERDLDFSEALIVYHNCELS VIDSFWQEVLRTLIDKATGDQDLVSKINALLGLEKIEITDIRELLREIGKRGKFLLLLLDDYHRILGTREEYPENQGKKS KKVLTFLSELRNLAVHNREGQYFSTIVATFQKLHELGPTIVPGGSPWYNHYAYLPLKPFCKSDIEGHFFNRDSHFFISDA PKEEVLKMTGGYPALLQFTGYIFSRLEPVNVDTLNTMLKNDADRIFQDVWNNFEKNEQEILQLILIDKYKGKFREISYSI AGIEKEFIRNISILKSLEEKGFISQVKQANKYSFTSSLMEDFIGDQLAEKNVSNAKDRKIVINLFIIKITLGLWKKVKEK IQPVTKFISPLAKIIDLIANKIEGK
Sequences:
>Translated_425_residues MPRNQFYPDKSVPPEKFVGRTSELSTIFDKINSRDHVAIFGSSGMGKTSLLQYIENSKFWEERDLDFSEALIVYHNCELS VIDSFWQEVLRTLIDKATGDQDLVSKINALLGLEKIEITDIRELLREIGKRGKFLLLLLDDYHRILGTREEYPENQGKKS KKVLTFLSELRNLAVHNREGQYFSTIVATFQKLHELGPTIVPGGSPWYNHYAYLPLKPFCKSDIEGHFFNRDSHFFISDA PKEEVLKMTGGYPALLQFTGYIFSRLEPVNVDTLNTMLKNDADRIFQDVWNNFEKNEQEILQLILIDKYKGKFREISYSI AGIEKEFIRNISILKSLEEKGFISQVKQANKYSFTSSLMEDFIGDQLAEKNVSNAKDRKIVINLFIIKITLGLWKKVKEK IQPVTKFISPLAKIIDLIANKIEGK >Mature_424_residues PRNQFYPDKSVPPEKFVGRTSELSTIFDKINSRDHVAIFGSSGMGKTSLLQYIENSKFWEERDLDFSEALIVYHNCELSV IDSFWQEVLRTLIDKATGDQDLVSKINALLGLEKIEITDIRELLREIGKRGKFLLLLLDDYHRILGTREEYPENQGKKSK KVLTFLSELRNLAVHNREGQYFSTIVATFQKLHELGPTIVPGGSPWYNHYAYLPLKPFCKSDIEGHFFNRDSHFFISDAP KEEVLKMTGGYPALLQFTGYIFSRLEPVNVDTLNTMLKNDADRIFQDVWNNFEKNEQEILQLILIDKYKGKFREISYSIA GIEKEFIRNISILKSLEEKGFISQVKQANKYSFTSSLMEDFIGDQLAEKNVSNAKDRKIVINLFIIKITLGLWKKVKEKI QPVTKFISPLAKIIDLIANKIEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49041; Mature: 48910
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRNQFYPDKSVPPEKFVGRTSELSTIFDKINSRDHVAIFGSSGMGKTSLLQYIENSKFW CCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCC EERDLDFSEALIVYHNCELSVIDSFWQEVLRTLIDKATGDQDLVSKINALLGLEKIEITD HHCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH IRELLREIGKRGKFLLLLLDDYHRILGTREEYPENQGKKSKKVLTFLSELRNLAVHNREG HHHHHHHHCCCCCEEEEEHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QYFSTIVATFQKLHELGPTIVPGGSPWYNHYAYLPLKPFCKSDIEGHFFNRDSHFFISDA HHHHHHHHHHHHHHHCCCEECCCCCCHHCCEEECCCCHHHHCCCCCCEECCCCCEEECCC PKEEVLKMTGGYPALLQFTGYIFSRLEPVNVDTLNTMLKNDADRIFQDVWNNFEKNEQEI CHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH LQLILIDKYKGKFREISYSIAGIEKEFIRNISILKSLEEKGFISQVKQANKYSFTSSLME HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFIGDQLAEKNVSNAKDRKIVINLFIIKITLGLWKKVKEKIQPVTKFISPLAKIIDLIAN HHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIEGK HHCCC >Mature Secondary Structure PRNQFYPDKSVPPEKFVGRTSELSTIFDKINSRDHVAIFGSSGMGKTSLLQYIENSKFW CCCCCCCCCCCCHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCC EERDLDFSEALIVYHNCELSVIDSFWQEVLRTLIDKATGDQDLVSKINALLGLEKIEITD HHCCCCHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH IRELLREIGKRGKFLLLLLDDYHRILGTREEYPENQGKKSKKVLTFLSELRNLAVHNREG HHHHHHHHCCCCCEEEEEHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC QYFSTIVATFQKLHELGPTIVPGGSPWYNHYAYLPLKPFCKSDIEGHFFNRDSHFFISDA HHHHHHHHHHHHHHHCCCEECCCCCCHHCCEEECCCCHHHHCCCCCCEECCCCCEEECCC PKEEVLKMTGGYPALLQFTGYIFSRLEPVNVDTLNTMLKNDADRIFQDVWNNFEKNEQEI CHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH LQLILIDKYKGKFREISYSIAGIEKEFIRNISILKSLEEKGFISQVKQANKYSFTSSLME HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DFIGDQLAEKNVSNAKDRKIVINLFIIKITLGLWKKVKEKIQPVTKFISPLAKIIDLIAN HHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIEGK HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA