Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475434

Identifier: 113475434

GI number: 113475434

Start: 2682530

End: 2684572

Strand: Direct

Name: 113475434

Synonym: Tery_1762

Alternate gene names: NA

Gene position: 2682530-2684572 (Clockwise)

Preceding gene: 113475433

Following gene: 113475436

Centisome position: 34.61

GC content: 34.21

Gene sequence:

>2043_bases
ATGAAACAAATCCTCTACCTAGAAGTACCAACACCAGATACAAAAACCGTTTGTCAATGGCTACAATCTAAATTTGAAGC
TGGTTTCGGCGAAAAAAATATAACTCCAGATGGCTTTATTATCAAATTTCCAGAAGCTCCAACTCAGGAAATTTCTGTAT
TTGTCTGGTCATTACAAAGAACTACCTATTTAAAAGTATTTGCCCAAGGAAATATCTCTCCAATACAAAAAAAATTTACC
TCAAACTTAACTACCAATTTGCGAAAAGAATTTCCTTTAAATTATCCAGAACCTCCCACAGTCGATCTATCAAATCAGTC
AATTTTTACAGCTTTAGCATCAGATTATCCCCTCACAGTCAAATACTTTCAAAAAATGCCTAGAGGAGAATATGACCTCA
ACCGTTTATATTGGTGGGAAAAACGTTGGCGTGAAGGAGTTAAAAATCCTCAAAAACCAAAACAAGTACTTTGGAAAAAA
GAGTCTGGAACAAATAATAATTCAATTGAATATGACTTAATTTATGTTGGTGGTGCTCTGGGAACTATTCATGCAGCAGT
CATGGCAAGACTAGGATATAAAGTATTATTATTAGAACGGTTACCTTTCGGTAAAATGAATCGAGAATGGAATATTTCTC
GCTCAGAACTTCAGAGTTTAATTGACTTAGGTTTATTTACTAACGCAGAAATAGAAAATTTAATTGCCAGAGAATATAAA
GATGGATTTAATAAATTTTTTGATGCTAATAACCCTGATTTTTGTAAGGCAGCAATTCTCCATACTCCCACTGTTTTAAA
TGTGGCATTAGATTCAGAAAAATTACTGAATATATGCGGAATAAAACTACAAGAAGCTGGAGGAAAAATCGTCGATGAAA
CAGAATTTATTAAAGCTGAAATTGAACCAGAAAAAGTTATAATTCACACTCAAAATTTATCTAGCAAAACTGAAGAAATT
TTCTGTGGGCGTTTATTAGTAGATGCCATGGGTACTGCTTCTCCTATCGCCTGGCAATTAAATGGTAAACGTGCTTTTGA
TAGTGTTTGTCCGACAGTCGGAGCAATAATTGATGGTGGATTTGAAGCAGGTGTTTGGGATTCAAATTATGGAGATGTTC
TAAATAGTCATGGGGATATTTCTCGTGGTCGACAATTGATTTGGGAGTTGTTTCCCGGTGCTGGAAATGAATTAACAATT
TATCTATTTCATTATCATCAAGTTCATCCTGAAAATCCTGGTTCTCTGTTAGAAATGTACGAAGATTTTTTCACTATTTT
ACCAGAATATCGACGCTGTGACATGGAGAAATTAGTATGGAAAAAGCCAACTTTTGGTTATATTCCTGGGCATTTTAGTA
TTAAAGCCAGCGATCGTCAAATTGCTTTTGACCGTTTAGTTTGTATTGGTGATGCTGCTTCTCTTCAGTCTCCTTTAGTA
TTTACTGGTTTTGGGTCTTTGGTCAGAAATTTACCTCGTTTAACCGAGCTTTTAGATACTGCTTTAAAACACGATTTACT
TAGTGCTAATCACTTAAATAAAATTCGTGCTTATCAAAGCAATATTGCTATTACTTGGTTATTTTCTAAAGGTATGATGG
TGCCCACAGGTAAATATTTACCCCCCCAAAGAATTAATTCTATTTTGAATACTTTTTTTGGGTTATTAGCAGACTCGCCC
CCGGAAGTAGCAGATACTTTTATTAAAGACCGAGCTAATTGGTGGATGTTTACAAAATTAGCCCTTAAAGCAGCCAGAAA
AAATTCTTATCTTTTATTATGGATTCTAGATTTTATTAATTTTCAGGAAATATTACTTTGGACAATAAGTTATATAAATT
TTACTTTGTTTAGTTTGGTAAGTTGGTTATTAGGATGGTTGCCTAACTTTGCCCGTTGGATTCAACCTTGGTTAGAACCT
CGTTATCCTGGTTTATGGTTTTGGATATTAGCAAATAGTTATGCCTTAACCTATAATGTCGGTCAACCACAGATAAACTT
TAAATTACAAAAGCCATTTCAGTCCGAAAGCTTGTCTGGGTAA

Upstream 100 bases:

>100_bases
CTAAGCTATAACTTATAAAATTTTACCATAAACTGTTAAAATAATACTTTTGATATTTATCAATTTAAACTTATAAATTT
AAGTGACTCGAAAAAAACAG

Downstream 100 bases:

>100_bases
TAATCACCATTACTATGGTAAATTACATTCATATTTCTTGTATGAGCGACAAAATAATTTGACTTTTTCCCAGGGGTAAC
AATAGTTCCTGTTAGCTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT
SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK
ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK
DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI
FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI
YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV
FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP
PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP
RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG

Sequences:

>Translated_680_residues
MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT
SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK
ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK
DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI
FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI
YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV
FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP
PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP
RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG
>Mature_680_residues
MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT
SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK
ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK
DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI
FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI
YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV
FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP
PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP
RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77879; Mature: 77879

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQR
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECC
TTYLKVFAQGNISPIQKKFTSNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTV
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCEEH
KYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKKESGTNNNSIEYDLIYVGGAL
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEEECCHH
GTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAE
HHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCEEECCCCCCCCCCHHEEEE
IEPEKVIIHTQNLSSKTEEIFCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
FEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTIYLFHYHQVHPENPGSLLEMY
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHH
EDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV
HHHHHHCCHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHEEEECCHHHCCCCEE
FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYL
EECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCEECCCCCCC
PPQRINSILNTFFGLLADSPPEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHC
FQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEPRYPGLWFWILANSYALTYNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEC
GQPQINFKLQKPFQSESLSG
CCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQR
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECC
TTYLKVFAQGNISPIQKKFTSNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTV
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCEEH
KYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKKESGTNNNSIEYDLIYVGGAL
HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEEECCHH
GTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK
HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAE
HHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCEEECCCCCCCCCCHHEEEE
IEPEKVIIHTQNLSSKTEEIFCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGG
CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
FEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTIYLFHYHQVHPENPGSLLEMY
CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHH
EDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV
HHHHHHCCHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHEEEECCHHHCCCCEE
FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYL
EECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCEECCCCCCC
PPQRINSILNTFFGLLADSPPEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFIN
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHC
FQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEPRYPGLWFWILANSYALTYNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEC
GQPQINFKLQKPFQSESLSG
CCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA