| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475434
Identifier: 113475434
GI number: 113475434
Start: 2682530
End: 2684572
Strand: Direct
Name: 113475434
Synonym: Tery_1762
Alternate gene names: NA
Gene position: 2682530-2684572 (Clockwise)
Preceding gene: 113475433
Following gene: 113475436
Centisome position: 34.61
GC content: 34.21
Gene sequence:
>2043_bases ATGAAACAAATCCTCTACCTAGAAGTACCAACACCAGATACAAAAACCGTTTGTCAATGGCTACAATCTAAATTTGAAGC TGGTTTCGGCGAAAAAAATATAACTCCAGATGGCTTTATTATCAAATTTCCAGAAGCTCCAACTCAGGAAATTTCTGTAT TTGTCTGGTCATTACAAAGAACTACCTATTTAAAAGTATTTGCCCAAGGAAATATCTCTCCAATACAAAAAAAATTTACC TCAAACTTAACTACCAATTTGCGAAAAGAATTTCCTTTAAATTATCCAGAACCTCCCACAGTCGATCTATCAAATCAGTC AATTTTTACAGCTTTAGCATCAGATTATCCCCTCACAGTCAAATACTTTCAAAAAATGCCTAGAGGAGAATATGACCTCA ACCGTTTATATTGGTGGGAAAAACGTTGGCGTGAAGGAGTTAAAAATCCTCAAAAACCAAAACAAGTACTTTGGAAAAAA GAGTCTGGAACAAATAATAATTCAATTGAATATGACTTAATTTATGTTGGTGGTGCTCTGGGAACTATTCATGCAGCAGT CATGGCAAGACTAGGATATAAAGTATTATTATTAGAACGGTTACCTTTCGGTAAAATGAATCGAGAATGGAATATTTCTC GCTCAGAACTTCAGAGTTTAATTGACTTAGGTTTATTTACTAACGCAGAAATAGAAAATTTAATTGCCAGAGAATATAAA GATGGATTTAATAAATTTTTTGATGCTAATAACCCTGATTTTTGTAAGGCAGCAATTCTCCATACTCCCACTGTTTTAAA TGTGGCATTAGATTCAGAAAAATTACTGAATATATGCGGAATAAAACTACAAGAAGCTGGAGGAAAAATCGTCGATGAAA CAGAATTTATTAAAGCTGAAATTGAACCAGAAAAAGTTATAATTCACACTCAAAATTTATCTAGCAAAACTGAAGAAATT TTCTGTGGGCGTTTATTAGTAGATGCCATGGGTACTGCTTCTCCTATCGCCTGGCAATTAAATGGTAAACGTGCTTTTGA TAGTGTTTGTCCGACAGTCGGAGCAATAATTGATGGTGGATTTGAAGCAGGTGTTTGGGATTCAAATTATGGAGATGTTC TAAATAGTCATGGGGATATTTCTCGTGGTCGACAATTGATTTGGGAGTTGTTTCCCGGTGCTGGAAATGAATTAACAATT TATCTATTTCATTATCATCAAGTTCATCCTGAAAATCCTGGTTCTCTGTTAGAAATGTACGAAGATTTTTTCACTATTTT ACCAGAATATCGACGCTGTGACATGGAGAAATTAGTATGGAAAAAGCCAACTTTTGGTTATATTCCTGGGCATTTTAGTA TTAAAGCCAGCGATCGTCAAATTGCTTTTGACCGTTTAGTTTGTATTGGTGATGCTGCTTCTCTTCAGTCTCCTTTAGTA TTTACTGGTTTTGGGTCTTTGGTCAGAAATTTACCTCGTTTAACCGAGCTTTTAGATACTGCTTTAAAACACGATTTACT TAGTGCTAATCACTTAAATAAAATTCGTGCTTATCAAAGCAATATTGCTATTACTTGGTTATTTTCTAAAGGTATGATGG TGCCCACAGGTAAATATTTACCCCCCCAAAGAATTAATTCTATTTTGAATACTTTTTTTGGGTTATTAGCAGACTCGCCC CCGGAAGTAGCAGATACTTTTATTAAAGACCGAGCTAATTGGTGGATGTTTACAAAATTAGCCCTTAAAGCAGCCAGAAA AAATTCTTATCTTTTATTATGGATTCTAGATTTTATTAATTTTCAGGAAATATTACTTTGGACAATAAGTTATATAAATT TTACTTTGTTTAGTTTGGTAAGTTGGTTATTAGGATGGTTGCCTAACTTTGCCCGTTGGATTCAACCTTGGTTAGAACCT CGTTATCCTGGTTTATGGTTTTGGATATTAGCAAATAGTTATGCCTTAACCTATAATGTCGGTCAACCACAGATAAACTT TAAATTACAAAAGCCATTTCAGTCCGAAAGCTTGTCTGGGTAA
Upstream 100 bases:
>100_bases CTAAGCTATAACTTATAAAATTTTACCATAAACTGTTAAAATAATACTTTTGATATTTATCAATTTAAACTTATAAATTT AAGTGACTCGAAAAAAACAG
Downstream 100 bases:
>100_bases TAATCACCATTACTATGGTAAATTACATTCATATTTCTTGTATGAGCGACAAAATAATTTGACTTTTTCCCAGGGGTAAC AATAGTTCCTGTTAGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 680; Mature: 680
Protein sequence:
>680_residues MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG
Sequences:
>Translated_680_residues MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG >Mature_680_residues MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQRTTYLKVFAQGNISPIQKKFT SNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTVKYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKK ESGTNNNSIEYDLIYVGGALGTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAEIEPEKVIIHTQNLSSKTEEI FCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGGFEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTI YLFHYHQVHPENPGSLLEMYEDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYLPPQRINSILNTFFGLLADSP PEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFINFQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEP RYPGLWFWILANSYALTYNVGQPQINFKLQKPFQSESLSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77879; Mature: 77879
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQR CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECC TTYLKVFAQGNISPIQKKFTSNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTV CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCEEH KYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKKESGTNNNSIEYDLIYVGGAL HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEEECCHH GTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAE HHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCEEECCCCCCCCCCHHEEEE IEPEKVIIHTQNLSSKTEEIFCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGG CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC FEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTIYLFHYHQVHPENPGSLLEMY CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHH EDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV HHHHHHCCHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHEEEECCHHHCCCCEE FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYL EECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCEECCCCCCC PPQRINSILNTFFGLLADSPPEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFIN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHC FQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEPRYPGLWFWILANSYALTYNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEC GQPQINFKLQKPFQSESLSG CCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MKQILYLEVPTPDTKTVCQWLQSKFEAGFGEKNITPDGFIIKFPEAPTQEISVFVWSLQR CCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEECC TTYLKVFAQGNISPIQKKFTSNLTTNLRKEFPLNYPEPPTVDLSNQSIFTALASDYPLTV CEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHCCCCEEH KYFQKMPRGEYDLNRLYWWEKRWREGVKNPQKPKQVLWKKESGTNNNSIEYDLIYVGGAL HHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCCCCEEEEEEEECCHH GTIHAAVMARLGYKVLLLERLPFGKMNREWNISRSELQSLIDLGLFTNAEIENLIAREYK HHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH DGFNKFFDANNPDFCKAAILHTPTVLNVALDSEKLLNICGIKLQEAGGKIVDETEFIKAE HHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHCCEEECCCCCCCCCCHHEEEE IEPEKVIIHTQNLSSKTEEIFCGRLLVDAMGTASPIAWQLNGKRAFDSVCPTVGAIIDGG CCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC FEAGVWDSNYGDVLNSHGDISRGRQLIWELFPGAGNELTIYLFHYHQVHPENPGSLLEMY CCCCCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCHHHHHHH EDFFTILPEYRRCDMEKLVWKKPTFGYIPGHFSIKASDRQIAFDRLVCIGDAASLQSPLV HHHHHHCCHHHHCCHHHHHHCCCCCCCCCCEEEEECCCCEEEEHHEEEECCHHHCCCCEE FTGFGSLVRNLPRLTELLDTALKHDLLSANHLNKIRAYQSNIAITWLFSKGMMVPTGKYL EECHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEEEEEECCEECCCCCCC PPQRINSILNTFFGLLADSPPEVADTFIKDRANWWMFTKLALKAARKNSYLLLWILDFIN CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEEHHHHHC FQEILLWTISYINFTLFSLVSWLLGWLPNFARWIQPWLEPRYPGLWFWILANSYALTYNV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEC GQPQINFKLQKPFQSESLSG CCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA