Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475436

Identifier: 113475436

GI number: 113475436

Start: 2685686

End: 2687011

Strand: Direct

Name: 113475436

Synonym: Tery_1764

Alternate gene names: NA

Gene position: 2685686-2687011 (Clockwise)

Preceding gene: 113475434

Following gene: 113475438

Centisome position: 34.65

GC content: 38.61

Gene sequence:

>1326_bases
ATGACTACTAAAAAACCAAAAATTATTGTTATAGATGACGATCCCACAGGTTCCCAAACTGTTCATAGCTGCCTACTCCT
AACCAAGTGGGATATAGAAACCCTCAAATTAGGATTACTTGACGAATCTCCCATATTTTTTATCCTCTCAAATACTCGCG
CTCTGACTCCCGAACAAGCAGCAACTGTAACACGAGAAATCACACAAAATCTGACAGAAGCGATCGCTCAATCAAACATT
CAAGATTTTTTAGTTGTCAGTCGTTCCGACTCTACTCTACGGGGTCACTACCCAATAGAAACAGATACTATTGCAGCAGA
ACTAGGTCAGTTTGATGCTCATTTCCTAATTCCAGCATTTTTTGAATGTGGAAGAATTACCCGTAACAGTACCCACTATT
TAATAGTCAATGGTGTAGAAACCCCAGTTCACGAAACAGAATTTGCCAAAGACTCTGTATTTGGCTACACAAGTAGTTAT
TTGCCTGATTATGTGGAGGAAAAAACTCAAGCTCAGATCAAAGCAGAAATTGTAGAAAAATTTACACTTAATGACATTCG
TTCTGGCAGTTTAGAACGTTTAATGAAACTGACTGGCAACCAATGTGGCGTTGTAGATGGAGAAACTCAAGCAGACTTAG
ATAGATTTGCCAATGATTTATTGGCAGCAGCAAGTCAAGGTAAAAAGTTTTTGTTGCGCAGTGCTGCCAGTATTTTAACT
TCCCTCACTGCTTTGAGTTCTCAACCTGTAGCTGCCGAGGAAATGAGACAATATGTCAGAGGTGGGAAACCAGGTGTAAT
TATTGTTGGTTCTCACGTGAAGAAGTCTACTCAACAGTTGGAAAGGTTATTACAAGAATCTGAAGTAGTAGGTGTAGAAG
TAGATGTATCTCATTTAGTTGAAGACTTTCAAGAGCAAAGAGCCACTTTACTAAAAAACATTCTCGAAAAAGTTTCTGCT
GTTAATACAGAAGGGAAAACAACAGTTGTTTATACAAGTCGCAAAGAGTTGACTTTTGAAAATGTGCAGGTGCGTTTAGA
GTTTGGTGTAGCAGTGTCGGAATTATTAATGGATATTGTTCGGGGTCTGCCAGAGGATATTGGATTTTTAATTAGTAAAG
GTGGAATTACTTCTAATGATACCTTGAGTAAAGGTTTAGCTTTAACTACTGCCAGGTTATTAGGTCAGGTTTTAGAAGGT
TGTTCAATAGTGCGGACTCCAGATTATCATCCTCAGTTTCCTGAATTACCTGTGGTATTATTTCCAGGGAATGTTGGAGA
TGTAGATGGGTTAGTAACAGTTTATCAGCGTTTGAGTGGAAAGTAA

Upstream 100 bases:

>100_bases
TTAATCCAATCAATAATTACGCAAACAGTTGACAGTTTTACTAACTCACCAGAAGATAAGAATATCCCAAAAATTTACTA
TTTCCTATTTATCCAAAAAC

Downstream 100 bases:

>100_bases
TTCCAGAAATGGCGAATATTACTCATCCATTGAGTATAGTCATTGACCTGCAACTCGTTACTTGGAAAAAATTAGTTAAA
AGCTAAATATAGTAAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MTTKKPKIIVIDDDPTGSQTVHSCLLLTKWDIETLKLGLLDESPIFFILSNTRALTPEQAATVTREITQNLTEAIAQSNI
QDFLVVSRSDSTLRGHYPIETDTIAAELGQFDAHFLIPAFFECGRITRNSTHYLIVNGVETPVHETEFAKDSVFGYTSSY
LPDYVEEKTQAQIKAEIVEKFTLNDIRSGSLERLMKLTGNQCGVVDGETQADLDRFANDLLAAASQGKKFLLRSAASILT
SLTALSSQPVAAEEMRQYVRGGKPGVIIVGSHVKKSTQQLERLLQESEVVGVEVDVSHLVEDFQEQRATLLKNILEKVSA
VNTEGKTTVVYTSRKELTFENVQVRLEFGVAVSELLMDIVRGLPEDIGFLISKGGITSNDTLSKGLALTTARLLGQVLEG
CSIVRTPDYHPQFPELPVVLFPGNVGDVDGLVTVYQRLSGK

Sequences:

>Translated_441_residues
MTTKKPKIIVIDDDPTGSQTVHSCLLLTKWDIETLKLGLLDESPIFFILSNTRALTPEQAATVTREITQNLTEAIAQSNI
QDFLVVSRSDSTLRGHYPIETDTIAAELGQFDAHFLIPAFFECGRITRNSTHYLIVNGVETPVHETEFAKDSVFGYTSSY
LPDYVEEKTQAQIKAEIVEKFTLNDIRSGSLERLMKLTGNQCGVVDGETQADLDRFANDLLAAASQGKKFLLRSAASILT
SLTALSSQPVAAEEMRQYVRGGKPGVIIVGSHVKKSTQQLERLLQESEVVGVEVDVSHLVEDFQEQRATLLKNILEKVSA
VNTEGKTTVVYTSRKELTFENVQVRLEFGVAVSELLMDIVRGLPEDIGFLISKGGITSNDTLSKGLALTTARLLGQVLEG
CSIVRTPDYHPQFPELPVVLFPGNVGDVDGLVTVYQRLSGK
>Mature_440_residues
TTKKPKIIVIDDDPTGSQTVHSCLLLTKWDIETLKLGLLDESPIFFILSNTRALTPEQAATVTREITQNLTEAIAQSNIQ
DFLVVSRSDSTLRGHYPIETDTIAAELGQFDAHFLIPAFFECGRITRNSTHYLIVNGVETPVHETEFAKDSVFGYTSSYL
PDYVEEKTQAQIKAEIVEKFTLNDIRSGSLERLMKLTGNQCGVVDGETQADLDRFANDLLAAASQGKKFLLRSAASILTS
LTALSSQPVAAEEMRQYVRGGKPGVIIVGSHVKKSTQQLERLLQESEVVGVEVDVSHLVEDFQEQRATLLKNILEKVSAV
NTEGKTTVVYTSRKELTFENVQVRLEFGVAVSELLMDIVRGLPEDIGFLISKGGITSNDTLSKGLALTTARLLGQVLEGC
SIVRTPDYHPQFPELPVVLFPGNVGDVDGLVTVYQRLSGK

Specific function: Unknown

COG id: COG3395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48447; Mature: 48316

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKKPKIIVIDDDPTGSQTVHSCLLLTKWDIETLKLGLLDESPIFFILSNTRALTPEQA
CCCCCCEEEEECCCCCCHHHHHHHHHHEECCHHHHEEECCCCCCEEEEEECCCCCCCHHH
ATVTREITQNLTEAIAQSNIQDFLVVSRSDSTLRGHYPIETDTIAAELGQFDAHFLIPAF
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHH
FECGRITRNSTHYLIVNGVETPVHETEFAKDSVFGYTSSYLPDYVEEKTQAQIKAEIVEK
HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHH
FTLNDIRSGSLERLMKLTGNQCGVVDGETQADLDRFANDLLAAASQGKKFLLRSAASILT
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLTALSSQPVAAEEMRQYVRGGKPGVIIVGSHVKKSTQQLERLLQESEVVGVEVDVSHLV
HHHHHCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEECHHHHH
EDFQEQRATLLKNILEKVSAVNTEGKTTVVYTSRKELTFENVQVRLEFGVAVSELLMDIV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECEEEEEEECHHHHHHHHHHH
RGLPEDIGFLISKGGITSNDTLSKGLALTTARLLGQVLEGCSIVRTPDYHPQFPELPVVL
HCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEE
FPGNVGDVDGLVTVYQRLSGK
ECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTKKPKIIVIDDDPTGSQTVHSCLLLTKWDIETLKLGLLDESPIFFILSNTRALTPEQA
CCCCCEEEEECCCCCCHHHHHHHHHHEECCHHHHEEECCCCCCEEEEEECCCCCCCHHH
ATVTREITQNLTEAIAQSNIQDFLVVSRSDSTLRGHYPIETDTIAAELGQFDAHFLIPAF
HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHH
FECGRITRNSTHYLIVNGVETPVHETEFAKDSVFGYTSSYLPDYVEEKTQAQIKAEIVEK
HHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHH
FTLNDIRSGSLERLMKLTGNQCGVVDGETQADLDRFANDLLAAASQGKKFLLRSAASILT
HHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
SLTALSSQPVAAEEMRQYVRGGKPGVIIVGSHVKKSTQQLERLLQESEVVGVEVDVSHLV
HHHHHCCCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEECHHHHH
EDFQEQRATLLKNILEKVSAVNTEGKTTVVYTSRKELTFENVQVRLEFGVAVSELLMDIV
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEECEEEEEEECHHHHHHHHHHH
RGLPEDIGFLISKGGITSNDTLSKGLALTTARLLGQVLEGCSIVRTPDYHPQFPELPVVL
HCCCHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEE
FPGNVGDVDGLVTVYQRLSGK
ECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA