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The map label for this gene is 113475412

Identifier: 113475412

GI number: 113475412

Start: 2648914

End: 2649309

Strand: Direct

Name: 113475412

Synonym: Tery_1740

Alternate gene names: NA

Gene position: 2648914-2649309 (Clockwise)

Preceding gene: 113475401

Following gene: 113475413

Centisome position: 34.18

GC content: 35.86

Gene sequence:

>396_bases
ATGAAAAGTTTTATTTCTCGTCTATTAGCCTTAGTTTTAGTTTGCGCCATAGGTTTGATGGGTTGTTCTAATCCCTCAAC
TTTAAGTGGAAATTATTCAGAAGATACATTAAGCTTAATTAACAGCTTAAAAACAGCTATTGAGTTACCAGAAAATACAG
AAGCTAAGAGTGAAGCTCAAGCAATAGCACGTCAAGCAATTAATGACTATGCTTCCCGTTATCGTCGTGATAATTCTGTG
TCCAGTCTACCATCATTTACCACAATGCGAACTGCTCTTGATTCTCTAGCAGGACATTATAGTTCTTATCCAAATCGTCC
TGTGCCTGATAAATTAAAGAAACGTTTAGCACAAGAATTTAAACAAGTAGAACTTGCTTTAAAGCGCGGAGTATAA

Upstream 100 bases:

>100_bases
TTTTTCAGTTTTTAAGAGTAGAGTAAAATTCCAACTTAAGCTAAACTTTAAATTATCAAAGAATCAAGAACAAATCAGAT
TGCATATTAATAAAAGTTCC

Downstream 100 bases:

>100_bases
TTGTTAGTTAGAAGTCAGAAAAAATTAACAATATTTATTCTCTATCTAGCTATTAGTTATTAGTTATTTTTAGATTTATT
CAAAAATCAAGAAAATTAGT

Product: photosystem II 11 kD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MKSFISRLLALVLVCAIGLMGCSNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQAIARQAINDYASRYRRDNSV
SSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEFKQVELALKRGV

Sequences:

>Translated_131_residues
MKSFISRLLALVLVCAIGLMGCSNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQAIARQAINDYASRYRRDNSV
SSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEFKQVELALKRGV
>Mature_131_residues
MKSFISRLLALVLVCAIGLMGCSNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQAIARQAINDYASRYRRDNSV
SSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEFKQVELALKRGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017488 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14412; Mature: 14412

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSFISRLLALVLVCAIGLMGCSNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
AIARQAINDYASRYRRDNSVSSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEF
HHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KQVELALKRGV
HHHHHHHHHCC
>Mature Secondary Structure
MKSFISRLLALVLVCAIGLMGCSNPSTLSGNYSEDTLSLINSLKTAIELPENTEAKSEAQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
AIARQAINDYASRYRRDNSVSSLPSFTTMRTALDSLAGHYSSYPNRPVPDKLKKRLAQEF
HHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
KQVELALKRGV
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]