Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475401

Identifier: 113475401

GI number: 113475401

Start: 2624876

End: 2625889

Strand: Direct

Name: 113475401

Synonym: Tery_1726

Alternate gene names: NA

Gene position: 2624876-2625889 (Clockwise)

Preceding gene: 113475400

Following gene: 113475412

Centisome position: 33.87

GC content: 29.98

Gene sequence:

>1014_bases
ATGGGGAATATTTCAGATTTAGAAGCAAATATATCACAAATGCAGCAGTTACTAAACGCTGCACAAAATGATATCCAAAA
GAAAACTTTTGAAGAAATTATTAATAGATTATCTCAGGAATTAGAAAAGGAAAAGTCTAAATTAAATTATTCTAAAGTCA
AGACTATAGAAGTAGATAAACCTTTAGAAGGAAAGGTGAAGAAAAAAATCATTCAACTGGGAAAACATGAAAGTAAAAAA
AATCAAAATTTAAAGCTTAAATGTGACTCTAAAATTGAAGAAAAATCACAGCTTGAAACAGAAGAAATATTATACAATAA
TGAGGAGGAAAGTCTACCTCCAAAACAGGATTATCTTTTCCACGGTTTAGGGGTTTTGTATGGTAGAATAGTTAAACGAT
ATGAGGATAATGATAATTATTATAATGCAATTATTGATGATAAAACTTATCAGTTAATTATTATTAATCCTAGGGTTAGA
CATTTCATGAAAGTAGATTATAATCCAGAAAAAAATAGATATTTAACTGTTTATCCTAATATAGTACATTATCCTCAACC
TAGAGGTGGGAGGAAGGAGCCGAAAGTTAGTTTTACTATTATTGCTGCTAATGATTTCCCTACCTTAGATCTAGAACCTA
ATGAGTTTAGATTATTTGGATTATGGCAGTTTATCGCTGTGTCAAGATGTCCTGTAATAAGTATTCATAGAAATAGGAAA
AATGATGGAAGCGATCGCGTATCAGTTATCAAGGAAAGGTTTAAGAATAATGATAAATTACATAAGAATTTAACTAGGGC
TAATCATGTTCCTTTATTATGGAGAGACTCTCCTGTTAAACCTTTTAAGTTTAATCCTAGATTTGATAAGGATAAACAAG
GCGATCGCTACTTTTGCAAAATAAAGGCTAAATTTCTGGCATATAGAGGTGTTTGGGGTTTCCAAGAATTACTTGTAGAA
CCTACTCTTGATATTCCCAAATTTTATAAGCCTATTAAAATAGCTTTCTCTTAA

Upstream 100 bases:

>100_bases
TAAAGGAGGATCTAAATACTAGCTATAAAAGCTACAGTATCTCAAAAAAAAGTTCTTATGAAGGTTAAGTATATTTTTTT
TATCTACTAATTACATAATT

Downstream 100 bases:

>100_bases
AATTAAAGGGGCAAATATTACAAAGACTCCTCAAAAGTTGACAGCTAGAGATTAAAAGTCTATTAGTAATATCTGACTAA
GTTTTAGAGTGTAGCTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MGNISDLEANISQMQQLLNAAQNDIQKKTFEEIINRLSQELEKEKSKLNYSKVKTIEVDKPLEGKVKKKIIQLGKHESKK
NQNLKLKCDSKIEEKSQLETEEILYNNEEESLPPKQDYLFHGLGVLYGRIVKRYEDNDNYYNAIIDDKTYQLIIINPRVR
HFMKVDYNPEKNRYLTVYPNIVHYPQPRGGRKEPKVSFTIIAANDFPTLDLEPNEFRLFGLWQFIAVSRCPVISIHRNRK
NDGSDRVSVIKERFKNNDKLHKNLTRANHVPLLWRDSPVKPFKFNPRFDKDKQGDRYFCKIKAKFLAYRGVWGFQELLVE
PTLDIPKFYKPIKIAFS

Sequences:

>Translated_337_residues
MGNISDLEANISQMQQLLNAAQNDIQKKTFEEIINRLSQELEKEKSKLNYSKVKTIEVDKPLEGKVKKKIIQLGKHESKK
NQNLKLKCDSKIEEKSQLETEEILYNNEEESLPPKQDYLFHGLGVLYGRIVKRYEDNDNYYNAIIDDKTYQLIIINPRVR
HFMKVDYNPEKNRYLTVYPNIVHYPQPRGGRKEPKVSFTIIAANDFPTLDLEPNEFRLFGLWQFIAVSRCPVISIHRNRK
NDGSDRVSVIKERFKNNDKLHKNLTRANHVPLLWRDSPVKPFKFNPRFDKDKQGDRYFCKIKAKFLAYRGVWGFQELLVE
PTLDIPKFYKPIKIAFS
>Mature_336_residues
GNISDLEANISQMQQLLNAAQNDIQKKTFEEIINRLSQELEKEKSKLNYSKVKTIEVDKPLEGKVKKKIIQLGKHESKKN
QNLKLKCDSKIEEKSQLETEEILYNNEEESLPPKQDYLFHGLGVLYGRIVKRYEDNDNYYNAIIDDKTYQLIIINPRVRH
FMKVDYNPEKNRYLTVYPNIVHYPQPRGGRKEPKVSFTIIAANDFPTLDLEPNEFRLFGLWQFIAVSRCPVISIHRNRKN
DGSDRVSVIKERFKNNDKLHKNLTRANHVPLLWRDSPVKPFKFNPRFDKDKQGDRYFCKIKAKFLAYRGVWGFQELLVEP
TLDIPKFYKPIKIAFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39737; Mature: 39606

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNISDLEANISQMQQLLNAAQNDIQKKTFEEIINRLSQELEKEKSKLNYSKVKTIEVDK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCC
PLEGKVKKKIIQLGKHESKKNQNLKLKCDSKIEEKSQLETEEILYNNEEESLPPKQDYLF
CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHHHHCCCCHHCCCCHHHHHH
HGLGVLYGRIVKRYEDNDNYYNAIIDDKTYQLIIINPRVRHFMKVDYNPEKNRYLTVYPN
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCHHHEEEEECCCCCCCCEEEECCC
IVHYPQPRGGRKEPKVSFTIIAANDFPTLDLEPNEFRLFGLWQFIAVSRCPVISIHRNRK
EEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCC
NDGSDRVSVIKERFKNNDKLHKNLTRANHVPLLWRDSPVKPFKFNPRFDKDKQGDRYFCK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEE
IKAKFLAYRGVWGFQELLVEPTLDIPKFYKPIKIAFS
EEEEHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEC
>Mature Secondary Structure 
GNISDLEANISQMQQLLNAAQNDIQKKTFEEIINRLSQELEKEKSKLNYSKVKTIEVDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEECCC
PLEGKVKKKIIQLGKHESKKNQNLKLKCDSKIEEKSQLETEEILYNNEEESLPPKQDYLF
CCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCHHHHHCCCCHHCCCCHHHHHH
HGLGVLYGRIVKRYEDNDNYYNAIIDDKTYQLIIINPRVRHFMKVDYNPEKNRYLTVYPN
HHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEECCHHHEEEEECCCCCCCCEEEECCC
IVHYPQPRGGRKEPKVSFTIIAANDFPTLDLEPNEFRLFGLWQFIAVSRCPVISIHRNRK
EEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHHHHHCCCCEEEEECCCC
NDGSDRVSVIKERFKNNDKLHKNLTRANHVPLLWRDSPVKPFKFNPRFDKDKQGDRYFCK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCEECCCCCCCCCCCCEEEEE
IKAKFLAYRGVWGFQELLVEPTLDIPKFYKPIKIAFS
EEEEHHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA