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The map label for this gene is 113475392

Identifier: 113475392

GI number: 113475392

Start: 2609544

End: 2610032

Strand: Reverse

Name: 113475392

Synonym: Tery_1716

Alternate gene names: NA

Gene position: 2610032-2609544 (Counterclockwise)

Preceding gene: 113475393

Following gene: 113475385

Centisome position: 33.68

GC content: 37.63

Gene sequence:

>489_bases
TTGTTGCTACAAGCTATTGAAATCTACAAAATTGCCCTCCCTGAAAATCATCCAAATATTGCTGTTAGTCTCAACAACCT
GGCAGAATTATATCGTGAGCAAGGAAAATATGAAGCAGCAGAACCGTTGTTGCTACAAGCAGTTGAAATCTACAAAATTG
CCCTCCCTGAAAATCATCCAAATATTGCTGTTAGTCTGAGCAACCTGGCAGAATTATATCGCGCACAAGGAAAATATGAA
GCAGCAGAACCGTTGTTGCTACAAGCTATTGAAATCTACAAAATTGCCCTCCCTGAAAATCATCCAAATATTGCCGCTAG
TCTCAACAACCTGGCAGAATTATATCGTGAGCAAGGAAAATACGAAGCGGCAGAACCGTTGTTGCTACAAGCAATTGAAA
TATTTAAACAATCATTAGGCGAAGAACATCCTCACACTCAAAAAGTTCAGGAAAACTATCAAATATTTTTAAACGATAAA
AACAATTAA

Upstream 100 bases:

>100_bases
TTAACCAAAATTAATTAGTTTGAGTTTTCATTTTTCGCTAACCTAAGTTATTTCCCAACAGCTCTATTATTCACAAGGAA
AATATGAAGCAGCAGAACCG

Downstream 100 bases:

>100_bases
AACTATTTTGACATCACTGTTTTTGCCCGCTATTACTGCTGTTGTTATTCTTGCACTGTAAATCTCTAGTCATAAGCAGA
GTAAGGAGAGAGCTGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Family Protein; Kinesin Light Chain; NB-ARC Domain-Containing Protein; NB-ARC Domain Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; Serine/Threonine Protein Kinase; Tetratricopeptide Repeat-Containing Protein; Nb-Arc; TPR Domain-Containing Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; SEFIR Domain Protein; TPR Domain Family Protein; SEC-C Motif Domain Protein; Tetratricopeptide TPR2 Protein; Serine/Threonine Protein Kinase With TPR Repeats; Tetratricopeptide Tpr_3 Repeat-Containing Protein; Helix-Turn-Helix Psq Domain Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; Protein Kinase; Sel1 Domain-Containing Protein; Peptidase-Like

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MLLQAIEIYKIALPENHPNIAVSLNNLAELYREQGKYEAAEPLLLQAVEIYKIALPENHPNIAVSLSNLAELYRAQGKYE
AAEPLLLQAIEIYKIALPENHPNIAASLNNLAELYREQGKYEAAEPLLLQAIEIFKQSLGEEHPHTQKVQENYQIFLNDK
NN

Sequences:

>Translated_162_residues
MLLQAIEIYKIALPENHPNIAVSLNNLAELYREQGKYEAAEPLLLQAVEIYKIALPENHPNIAVSLSNLAELYRAQGKYE
AAEPLLLQAIEIYKIALPENHPNIAASLNNLAELYREQGKYEAAEPLLLQAIEIFKQSLGEEHPHTQKVQENYQIFLNDK
NN
>Mature_162_residues
MLLQAIEIYKIALPENHPNIAVSLNNLAELYREQGKYEAAEPLLLQAVEIYKIALPENHPNIAVSLSNLAELYRAQGKYE
AAEPLLLQAIEIYKIALPENHPNIAASLNNLAELYREQGKYEAAEPLLLQAIEIFKQSLGEEHPHTQKVQENYQIFLNDK
NN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI33620730, Length=152, Percent_Identity=42.1052631578947, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI194306559, Length=152, Percent_Identity=42.1052631578947, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI110735431, Length=152, Percent_Identity=42.1052631578947, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI41871960, Length=152, Percent_Identity=42.1052631578947, Blast_Score=116, Evalue=7e-27,
Organism=Homo sapiens, GI41871955, Length=152, Percent_Identity=42.1052631578947, Blast_Score=116, Evalue=8e-27,
Organism=Homo sapiens, GI41871946, Length=152, Percent_Identity=42.1052631578947, Blast_Score=116, Evalue=8e-27,
Organism=Homo sapiens, GI198041728, Length=152, Percent_Identity=40.7894736842105, Blast_Score=108, Evalue=1e-24,
Organism=Homo sapiens, GI198041734, Length=152, Percent_Identity=40.7894736842105, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI198041731, Length=152, Percent_Identity=40.7894736842105, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI12383062, Length=152, Percent_Identity=40.7894736842105, Blast_Score=108, Evalue=2e-24,
Organism=Homo sapiens, GI91825557, Length=152, Percent_Identity=39.4736842105263, Blast_Score=104, Evalue=3e-23,
Organism=Homo sapiens, GI34304360, Length=156, Percent_Identity=37.1794871794872, Blast_Score=103, Evalue=5e-23,
Organism=Homo sapiens, GI19923891, Length=80, Percent_Identity=45, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71984524, Length=152, Percent_Identity=41.4473684210526, Blast_Score=120, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71984535, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71984527, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI71984517, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17541458, Length=126, Percent_Identity=42.8571428571429, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI17647555, Length=152, Percent_Identity=42.1052631578947, Blast_Score=120, Evalue=4e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18369; Mature: 18369

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQAIEIYKIALPENHPNIAVSLNNLAELYREQGKYEAAEPLLLQAVEIYKIALPENHP
CCCHHHHEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCC
NIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAASLNNLAELYREQGK
CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC
YEAAEPLLLQAIEIFKQSLGEEHPHTQKVQENYQIFLNDKNN
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCC
>Mature Secondary Structure
MLLQAIEIYKIALPENHPNIAVSLNNLAELYREQGKYEAAEPLLLQAVEIYKIALPENHP
CCCHHHHEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCC
NIAVSLSNLAELYRAQGKYEAAEPLLLQAIEIYKIALPENHPNIAASLNNLAELYREQGK
CEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCC
YEAAEPLLLQAIEIFKQSLGEEHPHTQKVQENYQIFLNDKNN
CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA