Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475385

Identifier: 113475385

GI number: 113475385

Start: 2600090

End: 2601229

Strand: Reverse

Name: 113475385

Synonym: Tery_1709

Alternate gene names: NA

Gene position: 2601229-2600090 (Counterclockwise)

Preceding gene: 113475392

Following gene: 113475384

Centisome position: 33.56

GC content: 34.82

Gene sequence:

>1140_bases
GTGAATTGTTCCATAGTTAGTACAGGACAAAATATCCAATATTGGCAAAAAACAGGGCTAGAATTAGTTGCCAATATTTA
TGGTGGACGAGATGTAGTATTAGCAATTGACTTAACAGAAAGTGTAGGCTTAAATGATGAAGGTCGTATCCGTTTGCGTC
AGATCGTTAAAGATAGTTTGCGGCCTGGAGATAAAGTCTATGTTGTACCTTTTGCCACAAATATTAATCCTCTCGCACCA
AGAATTAATCCCTTGACAGTTGAAGGGGCAGTTAAATTTAATGGCAAACAAGACATCAGTAAAATTTTGGAGTTAGTGCC
ATTTAAGCCAAATTTAACTCTACAAAATACGGATATTCAAGGAGCAGAATTATTTCTTTATCAAAACCTAGCTCAGATTA
ATCAATGTCGCTTAGAAAAAAATCAATCGATTAAACCTCAGTCGGTAATTTGGATTACTGATGCACCACTTTTAACTGCA
GCAGGAATTGATTCAAATGTGTGGATAGAAACTCCTAAAGATAGCCCTTTTAGAGTAGAAAATTCTGAGGAAAGTCAACG
GCGAATATCTTGGATAAATGCTTTACCTTTAGACGAGAGAAAGCTGTTAATTAGAACAGAAAATGGTGAAGAATATCAAC
TAGCGGTTGTGGATATTGCTCCTACTGTTCAAGAATTTTGTACCCCAGCACCGGGAGGCAGGGAAACTTGTTTGGTTAAT
TCTTATTTAGGGAAGTTATTATGGCTACCTGGGTTAATTTTTTTGTTGGTTTTTATAGGGTTTATAGTGGGAGTAAAAAA
ATGGATAAGTCTGCAAAAAAAATGGGAGTTAATTGTTGATTTTAGTAGCAGTAAAATCGAGGAATACCAAATTTGTCGTT
TGCCGAATAATAAAAAAATTGCTATTGGTGAATATGATGAATTTTGTGTTGATTCAATAGATACCCCCGGACCAGAAATT
CGAGGTTTTTTAATCAGGAAAGGAAATCGACTTTCTCTAGAACCAACTGGGAATGCAGAAATTTATCTTAATGGGAAAAA
AGTTTTGAGTCGTACTTTAATATCTAGTTCTCAAGTTAGGCTTAATTGTCCTGATGGAAGAAATCGCGATTATGAGATAA
TTATCAAAATTAAAAAATAG

Upstream 100 bases:

>100_bases
ATGTCTTATGTGACTATATTTTTTTGACCTATGATGGGTTATAGTTTAATTAATTCAATTATTAATCACCATTAACTCAT
TTTCTAATTTTTTATTTGTA

Downstream 100 bases:

>100_bases
TAAAGGTAAGTATTCAGGGTTCAGCTATTAGCTATTAGCTTTATTGTTTTTAAAGGAATAAAAAGCAATTGAGAGGTTTT
AAAGAATTAAAAGTATGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MNCSIVSTGQNIQYWQKTGLELVANIYGGRDVVLAIDLTESVGLNDEGRIRLRQIVKDSLRPGDKVYVVPFATNINPLAP
RINPLTVEGAVKFNGKQDISKILELVPFKPNLTLQNTDIQGAELFLYQNLAQINQCRLEKNQSIKPQSVIWITDAPLLTA
AGIDSNVWIETPKDSPFRVENSEESQRRISWINALPLDERKLLIRTENGEEYQLAVVDIAPTVQEFCTPAPGGRETCLVN
SYLGKLLWLPGLIFLLVFIGFIVGVKKWISLQKKWELIVDFSSSKIEEYQICRLPNNKKIAIGEYDEFCVDSIDTPGPEI
RGFLIRKGNRLSLEPTGNAEIYLNGKKVLSRTLISSSQVRLNCPDGRNRDYEIIIKIKK

Sequences:

>Translated_379_residues
MNCSIVSTGQNIQYWQKTGLELVANIYGGRDVVLAIDLTESVGLNDEGRIRLRQIVKDSLRPGDKVYVVPFATNINPLAP
RINPLTVEGAVKFNGKQDISKILELVPFKPNLTLQNTDIQGAELFLYQNLAQINQCRLEKNQSIKPQSVIWITDAPLLTA
AGIDSNVWIETPKDSPFRVENSEESQRRISWINALPLDERKLLIRTENGEEYQLAVVDIAPTVQEFCTPAPGGRETCLVN
SYLGKLLWLPGLIFLLVFIGFIVGVKKWISLQKKWELIVDFSSSKIEEYQICRLPNNKKIAIGEYDEFCVDSIDTPGPEI
RGFLIRKGNRLSLEPTGNAEIYLNGKKVLSRTLISSSQVRLNCPDGRNRDYEIIIKIKK
>Mature_379_residues
MNCSIVSTGQNIQYWQKTGLELVANIYGGRDVVLAIDLTESVGLNDEGRIRLRQIVKDSLRPGDKVYVVPFATNINPLAP
RINPLTVEGAVKFNGKQDISKILELVPFKPNLTLQNTDIQGAELFLYQNLAQINQCRLEKNQSIKPQSVIWITDAPLLTA
AGIDSNVWIETPKDSPFRVENSEESQRRISWINALPLDERKLLIRTENGEEYQLAVVDIAPTVQEFCTPAPGGRETCLVN
SYLGKLLWLPGLIFLLVFIGFIVGVKKWISLQKKWELIVDFSSSKIEEYQICRLPNNKKIAIGEYDEFCVDSIDTPGPEI
RGFLIRKGNRLSLEPTGNAEIYLNGKKVLSRTLISSSQVRLNCPDGRNRDYEIIIKIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42713; Mature: 42713

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCSIVSTGQNIQYWQKTGLELVANIYGGRDVVLAIDLTESVGLNDEGRIRLRQIVKDSL
CCCEEEECCCCCHHHHHCCHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHHHHC
RPGDKVYVVPFATNINPLAPRINPLTVEGAVKFNGKQDISKILELVPFKPNLTLQNTDIQ
CCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCC
GAELFLYQNLAQINQCRLEKNQSIKPQSVIWITDAPLLTAAGIDSNVWIETPKDSPFRVE
CEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCEEEC
NSEESQRRISWINALPLDERKLLIRTENGEEYQLAVVDIAPTVQEFCTPAPGGRETCLVN
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCHHHHHHCCCCCCCCCEEEHH
SYLGKLLWLPGLIFLLVFIGFIVGVKKWISLQKKWELIVDFSSSKIEEYQICRLPNNKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCEE
AIGEYDEFCVDSIDTPGPEIRGFLIRKGNRLSLEPTGNAEIYLNGKKVLSRTLISSSQVR
EECCCHHHHHHCCCCCCHHHEEEEEECCCEEEECCCCCEEEEECHHHHHHHHHHCCCEEE
LNCPDGRNRDYEIIIKIKK
EECCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MNCSIVSTGQNIQYWQKTGLELVANIYGGRDVVLAIDLTESVGLNDEGRIRLRQIVKDSL
CCCEEEECCCCCHHHHHCCHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHHHHC
RPGDKVYVVPFATNINPLAPRINPLTVEGAVKFNGKQDISKILELVPFKPNLTLQNTDIQ
CCCCEEEEEEEECCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCC
GAELFLYQNLAQINQCRLEKNQSIKPQSVIWITDAPLLTAAGIDSNVWIETPKDSPFRVE
CEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEECCCCCCEEEECCCCCCEEEC
NSEESQRRISWINALPLDERKLLIRTENGEEYQLAVVDIAPTVQEFCTPAPGGRETCLVN
CCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEECCHHHHHHCCCCCCCCCEEEHH
SYLGKLLWLPGLIFLLVFIGFIVGVKKWISLQKKWELIVDFSSSKIEEYQICRLPNNKKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCEE
AIGEYDEFCVDSIDTPGPEIRGFLIRKGNRLSLEPTGNAEIYLNGKKVLSRTLISSSQVR
EECCCHHHHHHCCCCCCHHHEEEEEECCCEEEECCCCCEEEEECHHHHHHHHHHCCCEEE
LNCPDGRNRDYEIIIKIKK
EECCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA