| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475377
Identifier: 113475377
GI number: 113475377
Start: 2582888
End: 2583367
Strand: Reverse
Name: 113475377
Synonym: Tery_1700
Alternate gene names: NA
Gene position: 2583367-2582888 (Counterclockwise)
Preceding gene: 113475378
Following gene: 113475376
Centisome position: 33.33
GC content: 37.71
Gene sequence:
>480_bases ATGGGTACTAGAGAAGCATCTTTTTTATTAGGTATCTCTCGTCAACGTTTATTAGTTTTATTAGCTCAAGGAAGAGTCAA AGGTGCTGATAAAAAAGGTAGAATATGGGAAATACCAGCTAATTCGAGTGGAATGCCTGTAATAATTCCGGCTCGGCGCG GTCCGAAAGGTATTTGGCACAAGCAAGAACCCACTGAACCTAAAATGATTCATGTTAATCAAAGCAAGATTAAAAGTAAT AAGCGTAAGCCTCCAGAAAAACTAGAACCAGTTGTTTCTGTTAAGGATGGTAAACGCAACGACTATGGTTATGATTTATA TATTCCAGGTCCTTGTCTAATCGTCTATCGACCTTACGAACCAGCAAAATGTGGTGCTCATCTGTGGATTAATACTTATA ATTGTGTGGAATTTGTAGATACCCAGTTTAATTTTAATCCAGCTACTGCAAGACAACCTAGCAAACAAATCTGCATATAG
Upstream 100 bases:
>100_bases AACATAAAACATATTTTTAACTAAAGTCCCGTTACGTAACTCTCTCAAAGTTACCTTTTTATTATAAAATAACTATTGTC CAATAGTTGAAAAAAAAATC
Downstream 100 bases:
>100_bases TTTATTTCCATCTTGGGGTGGAATAATTGCGCCTGTTTGACTCTAGAACGATCAATTAGCTTACGAGGTGACGAGTTTAT CAAGCTGGTATATCTGACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MGTREASFLLGISRQRLLVLLAQGRVKGADKKGRIWEIPANSSGMPVIIPARRGPKGIWHKQEPTEPKMIHVNQSKIKSN KRKPPEKLEPVVSVKDGKRNDYGYDLYIPGPCLIVYRPYEPAKCGAHLWINTYNCVEFVDTQFNFNPATARQPSKQICI
Sequences:
>Translated_159_residues MGTREASFLLGISRQRLLVLLAQGRVKGADKKGRIWEIPANSSGMPVIIPARRGPKGIWHKQEPTEPKMIHVNQSKIKSN KRKPPEKLEPVVSVKDGKRNDYGYDLYIPGPCLIVYRPYEPAKCGAHLWINTYNCVEFVDTQFNFNPATARQPSKQICI >Mature_158_residues GTREASFLLGISRQRLLVLLAQGRVKGADKKGRIWEIPANSSGMPVIIPARRGPKGIWHKQEPTEPKMIHVNQSKIKSNK RKPPEKLEPVVSVKDGKRNDYGYDLYIPGPCLIVYRPYEPAKCGAHLWINTYNCVEFVDTQFNFNPATARQPSKQICI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17998; Mature: 17867
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTREASFLLGISRQRLLVLLAQGRVKGADKKGRIWEIPANSSGMPVIIPARRGPKGIWH CCCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCC KQEPTEPKMIHVNQSKIKSNKRKPPEKLEPVVSVKDGKRNDYGYDLYIPGPCLIVYRPYE CCCCCCCCEEEECHHHHHCCCCCCHHHCCCEEEECCCCCCCCCEEEEECCCEEEEECCCC PAKCGAHLWINTYNCVEFVDTQFNFNPATARQPSKQICI CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GTREASFLLGISRQRLLVLLAQGRVKGADKKGRIWEIPANSSGMPVIIPARRGPKGIWH CCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCCC KQEPTEPKMIHVNQSKIKSNKRKPPEKLEPVVSVKDGKRNDYGYDLYIPGPCLIVYRPYE CCCCCCCCEEEECHHHHHCCCCCCHHHCCCEEEECCCCCCCCCEEEEECCCEEEEECCCC PAKCGAHLWINTYNCVEFVDTQFNFNPATARQPSKQICI CCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA