| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475378
Identifier: 113475378
GI number: 113475378
Start: 2583999
End: 2586362
Strand: Reverse
Name: 113475378
Synonym: Tery_1701
Alternate gene names: NA
Gene position: 2586362-2583999 (Counterclockwise)
Preceding gene: 113475379
Following gene: 113475377
Centisome position: 33.37
GC content: 34.26
Gene sequence:
>2364_bases ATGAGAAGTCGTGAGTGGAGGACAAGGCGGAATCGCTTTCGACGAATGTATGATGACCGTTGGCGCGATCTAACCCCCGA TTTAATGTTTCCCATAGACGCGCCTGAAAGAACTCGTGAGTTATCTTTTAATGTAAAAAATAATACTGCAATGCCTGGAA TTGGTGAATCCATGCGTTTTGCTGCACGCTTAGGAATTGGTCGTCATGTACCATGTTTTGTTTTTTTCACTGATATAGGT GAATTAACGATTGATGTTTTTCCTGTGGGAAATTTATCAGCCGATGAGGCTTTCTATCAAATGAGATATTGGATTGACGA CTTCTATCAAGAAAACCAGGTATCACTGAACAAATGGAATCAAGTTGAGCAAGATATTATTTCCTTTATAAGTTCCATTG ATCGATCACTCACAGACATTAAGGATTGGATTAATAAAAGCGAGAGATTATGGGATGAACTGATATTGGTCGCCCAAATT ATTGAAAAGCTTCGCAAATTAGGACAGCAGACAACAGACTATAAATCTTTGATTGATAATCTTAGTACTTCTTCTTGGAG ATGCAACAGGATTGTGTCTGATTGTCGCGTTCGCTTGGAAAGTATATCCAAAAAACGAGAAAAGCATCAACTTGAACAAG AAAACCTTAAGGTTGCTATTAACAAACTCAAGACAATTTCCATCTCCACCAATATTTATGATGAATGTCTTCTTGCAGCA AGCCAACTTCTTACTTCAAAAGCATCAAAAATCTTAGAAAAAGCAGCAAAACGTATAAAGCAAAAAAGCAACTCAAAATT CATCTCATTAGAAAATCAATTATTTCAGTGGTGGGGAAATACCAAGAAATGTATTCCATCATTTAATAAGTTTAAGAAAG CCCATAAAAAACAATCTGAATTGCATACTCAGTCTCATGAAATTCTCAAATATAAATATAATAATTATAATAATTTTATT GCATCTATTTTTGAACTACCATTTTCAGATAGGCAAGAAATATTTTTAGAGAAAGCTAAACTATTATGTGATGAATCTGA TATAGATTTCTCTGAATACTCTTTGCAATTAACTGAATTTTTTACACAGTTACATACTCAAGTTCCTAAATGGATAGATG GAACTAATCTAAAAATCTCTATTCTTTTTCCCTTTAAGAGCCGAGATAGTATTAGTTTTGATACAGTTATGGCCTCAATT GGATATGAGCATCCTATTAGCCAAATGATCAGAGAAAATATGACGGTTGAGCAAAAAAAGAAAAAAGAAAAATTAGTATC AGAAACTGAAAGAATAGTATTGCAATATAGAGATGAGGCATTAGCTGAACTAATCAAGCTAAGAAAACAACCATTGGATG TATCTACTGAAGAAATAGACACATACTCAACCTGCCTTGACAATATGTATAATCTACGCAATGAAATTGAAAATGAACTA ATCAATTTGGCTAACTCTAGCTCTAGTCTGGAAAAATCTTTGCGTTTAGTTGAACCAAAAGATATTGAAAACTTTCTAAA GCTATTGAATGAGTATAGAGAGACTACTAACAAGTTTTTTTATCCATACAAGAAAAATCCCAGAATTCAACAAGTGAATA TTGACCAACCGCTGCCACAAATTTTTGAATTAAAATTACGAGAAAATCATCTAAATACATCAAACACAAGAGCTAGAGAA TTAGAACAAAAATTAGCAAAAACCATACCCAATTCTGAAAATGGGGTCAAATTGTTACAAAATGTCCAACAGAAGTCTTA CACAGTGACCCCTAAAGCACGGCTTGTAAGTGAGATCTTGAAAATCAAGGAAAGCCCTCAGAATAGCTCACGACCAAATT CTGTTCCTCCAATATTTTCTGATTCAAATTATCCAGAAAATTTTGAAGAAATACTATGCGGATTAAATGATCAAGAGTTG AGAATTCTATCAAACTCAATAGCAAAGTTAGATTTAGATGCTGTAGTAGGCTCTAGGGAAGAGATTATTAATATAATTCT TACTATTGTTGGTTTACTTCCTAGTAGAGAACTTACTACTCATCGTCAGTATGCAAATCGCCCAATTAATTTAGAGGTAA GTACCATGACAGAATCCAAAAATGTTGAAGTTGAAATGAACTTTAACAGTCAAGTTATTGGAGCAACTGGAAAAAATGAA GGTATTATCAATATTAATACCTCTGATCGCCAAATTCTTGCAGAGGCTGCTGAGGAGATCCAAAAACTTCTAAGGCAGCT TGAGAAAACTAACCCTTCTGCAACTGAGCTTGAACAAGTAGCTTATGTTGATGTTACAGTTTATCCAAGTCACCAAGCAA CGAACCATTGCTGCTTTAAGGGCGGGAGGTGGAACTGCAATTGA
Upstream 100 bases:
>100_bases GGCCCTACAGATCGCAGACGCCCTTTATCGTTTAGTTTGCCAACATAAAGATAATCCTGATACACAGCTCGAAGCAGGCA TATACCAACTTATTGAGGAG
Downstream 100 bases:
>100_bases CGAATTTTTTCTGGAAAACAAGTATCTCAAAGTTGGGAAAGCAATTGTCCAAGCATGGCTACAACCAAGTAGCTAAAAAT TTCTCAGAGAGATTGTCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 787; Mature: 787
Protein sequence:
>787_residues MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN
Sequences:
>Translated_787_residues MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN >Mature_787_residues MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91637; Mature: 91637
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRF CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHEEEEECCCCCCCCCCHHHHH AARLGIGRHVPCFVFFTDIGELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWN HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH QVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQIIEKLRKLGQQTTDYKSLIDN HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHH SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH LHTQSHEILKYKYNNYNNFIASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEF HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASIGYEHPISQMIRENMTVEQKK HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHH KKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQ HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCHH IFELKLRENHLNTSNTRARELEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEIL HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCHHHHHHHHHH KIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQELRILSNSIAKLDLDAVVGSRE HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH EIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCCCC GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFK CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCEEC GGRWNCN CCCCCCC >Mature Secondary Structure MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRF CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHEEEEECCCCCCCCCCHHHHH AARLGIGRHVPCFVFFTDIGELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWN HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH QVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQIIEKLRKLGQQTTDYKSLIDN HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC LSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHH SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSE HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH LHTQSHEILKYKYNNYNNFIASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEF HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASIGYEHPISQMIRENMTVEQKK HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHH KKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQ HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCHH IFELKLRENHLNTSNTRARELEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEIL HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCHHHHHHHHHH KIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQELRILSNSIAKLDLDAVVGSRE HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH EIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCCCC GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFK CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCEEC GGRWNCN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA