Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475378

Identifier: 113475378

GI number: 113475378

Start: 2583999

End: 2586362

Strand: Reverse

Name: 113475378

Synonym: Tery_1701

Alternate gene names: NA

Gene position: 2586362-2583999 (Counterclockwise)

Preceding gene: 113475379

Following gene: 113475377

Centisome position: 33.37

GC content: 34.26

Gene sequence:

>2364_bases
ATGAGAAGTCGTGAGTGGAGGACAAGGCGGAATCGCTTTCGACGAATGTATGATGACCGTTGGCGCGATCTAACCCCCGA
TTTAATGTTTCCCATAGACGCGCCTGAAAGAACTCGTGAGTTATCTTTTAATGTAAAAAATAATACTGCAATGCCTGGAA
TTGGTGAATCCATGCGTTTTGCTGCACGCTTAGGAATTGGTCGTCATGTACCATGTTTTGTTTTTTTCACTGATATAGGT
GAATTAACGATTGATGTTTTTCCTGTGGGAAATTTATCAGCCGATGAGGCTTTCTATCAAATGAGATATTGGATTGACGA
CTTCTATCAAGAAAACCAGGTATCACTGAACAAATGGAATCAAGTTGAGCAAGATATTATTTCCTTTATAAGTTCCATTG
ATCGATCACTCACAGACATTAAGGATTGGATTAATAAAAGCGAGAGATTATGGGATGAACTGATATTGGTCGCCCAAATT
ATTGAAAAGCTTCGCAAATTAGGACAGCAGACAACAGACTATAAATCTTTGATTGATAATCTTAGTACTTCTTCTTGGAG
ATGCAACAGGATTGTGTCTGATTGTCGCGTTCGCTTGGAAAGTATATCCAAAAAACGAGAAAAGCATCAACTTGAACAAG
AAAACCTTAAGGTTGCTATTAACAAACTCAAGACAATTTCCATCTCCACCAATATTTATGATGAATGTCTTCTTGCAGCA
AGCCAACTTCTTACTTCAAAAGCATCAAAAATCTTAGAAAAAGCAGCAAAACGTATAAAGCAAAAAAGCAACTCAAAATT
CATCTCATTAGAAAATCAATTATTTCAGTGGTGGGGAAATACCAAGAAATGTATTCCATCATTTAATAAGTTTAAGAAAG
CCCATAAAAAACAATCTGAATTGCATACTCAGTCTCATGAAATTCTCAAATATAAATATAATAATTATAATAATTTTATT
GCATCTATTTTTGAACTACCATTTTCAGATAGGCAAGAAATATTTTTAGAGAAAGCTAAACTATTATGTGATGAATCTGA
TATAGATTTCTCTGAATACTCTTTGCAATTAACTGAATTTTTTACACAGTTACATACTCAAGTTCCTAAATGGATAGATG
GAACTAATCTAAAAATCTCTATTCTTTTTCCCTTTAAGAGCCGAGATAGTATTAGTTTTGATACAGTTATGGCCTCAATT
GGATATGAGCATCCTATTAGCCAAATGATCAGAGAAAATATGACGGTTGAGCAAAAAAAGAAAAAAGAAAAATTAGTATC
AGAAACTGAAAGAATAGTATTGCAATATAGAGATGAGGCATTAGCTGAACTAATCAAGCTAAGAAAACAACCATTGGATG
TATCTACTGAAGAAATAGACACATACTCAACCTGCCTTGACAATATGTATAATCTACGCAATGAAATTGAAAATGAACTA
ATCAATTTGGCTAACTCTAGCTCTAGTCTGGAAAAATCTTTGCGTTTAGTTGAACCAAAAGATATTGAAAACTTTCTAAA
GCTATTGAATGAGTATAGAGAGACTACTAACAAGTTTTTTTATCCATACAAGAAAAATCCCAGAATTCAACAAGTGAATA
TTGACCAACCGCTGCCACAAATTTTTGAATTAAAATTACGAGAAAATCATCTAAATACATCAAACACAAGAGCTAGAGAA
TTAGAACAAAAATTAGCAAAAACCATACCCAATTCTGAAAATGGGGTCAAATTGTTACAAAATGTCCAACAGAAGTCTTA
CACAGTGACCCCTAAAGCACGGCTTGTAAGTGAGATCTTGAAAATCAAGGAAAGCCCTCAGAATAGCTCACGACCAAATT
CTGTTCCTCCAATATTTTCTGATTCAAATTATCCAGAAAATTTTGAAGAAATACTATGCGGATTAAATGATCAAGAGTTG
AGAATTCTATCAAACTCAATAGCAAAGTTAGATTTAGATGCTGTAGTAGGCTCTAGGGAAGAGATTATTAATATAATTCT
TACTATTGTTGGTTTACTTCCTAGTAGAGAACTTACTACTCATCGTCAGTATGCAAATCGCCCAATTAATTTAGAGGTAA
GTACCATGACAGAATCCAAAAATGTTGAAGTTGAAATGAACTTTAACAGTCAAGTTATTGGAGCAACTGGAAAAAATGAA
GGTATTATCAATATTAATACCTCTGATCGCCAAATTCTTGCAGAGGCTGCTGAGGAGATCCAAAAACTTCTAAGGCAGCT
TGAGAAAACTAACCCTTCTGCAACTGAGCTTGAACAAGTAGCTTATGTTGATGTTACAGTTTATCCAAGTCACCAAGCAA
CGAACCATTGCTGCTTTAAGGGCGGGAGGTGGAACTGCAATTGA

Upstream 100 bases:

>100_bases
GGCCCTACAGATCGCAGACGCCCTTTATCGTTTAGTTTGCCAACATAAAGATAATCCTGATACACAGCTCGAAGCAGGCA
TATACCAACTTATTGAGGAG

Downstream 100 bases:

>100_bases
CGAATTTTTTCTGGAAAACAAGTATCTCAAAGTTGGGAAAGCAATTGTCCAAGCATGGCTACAACCAAGTAGCTAAAAAT
TTCTCAGAGAGATTGTCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 787

Protein sequence:

>787_residues
MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG
ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI
IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA
SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI
ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI
GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL
INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE
LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL
RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE
GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN

Sequences:

>Translated_787_residues
MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG
ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI
IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA
SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI
ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI
GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL
INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE
LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL
RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE
GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN
>Mature_787_residues
MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRFAARLGIGRHVPCFVFFTDIG
ELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWNQVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQI
IEKLRKLGQQTTDYKSLIDNLSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA
SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSELHTQSHEILKYKYNNYNNFI
ASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEFFTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASI
GYEHPISQMIRENMTVEQKKKKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL
INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQIFELKLRENHLNTSNTRARE
LEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEILKIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQEL
RILSNSIAKLDLDAVVGSREEIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE
GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFKGGRWNCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91637; Mature: 91637

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHEEEEECCCCCCCCCCHHHHH
AARLGIGRHVPCFVFFTDIGELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWN
HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQIIEKLRKLGQQTTDYKSLIDN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHH
SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
LHTQSHEILKYKYNNYNNFIASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEF
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASIGYEHPISQMIRENMTVEQKK
HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
KKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQ
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCHH
IFELKLRENHLNTSNTRARELEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEIL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCHHHHHHHHHH
KIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQELRILSNSIAKLDLDAVVGSRE
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
EIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCCCC
GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFK
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCEEC
GGRWNCN
CCCCCCC
>Mature Secondary Structure
MRSREWRTRRNRFRRMYDDRWRDLTPDLMFPIDAPERTRELSFNVKNNTAMPGIGESMRF
CCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHEEEEECCCCCCCCCCHHHHH
AARLGIGRHVPCFVFFTDIGELTIDVFPVGNLSADEAFYQMRYWIDDFYQENQVSLNKWN
HHHHCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
QVEQDIISFISSIDRSLTDIKDWINKSERLWDELILVAQIIEKLRKLGQQTTDYKSLIDN
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
LSTSSWRCNRIVSDCRVRLESISKKREKHQLEQENLKVAINKLKTISISTNIYDECLLAA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECHHHHHHHHHH
SQLLTSKASKILEKAAKRIKQKSNSKFISLENQLFQWWGNTKKCIPSFNKFKKAHKKQSE
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHH
LHTQSHEILKYKYNNYNNFIASIFELPFSDRQEIFLEKAKLLCDESDIDFSEYSLQLTEF
HHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FTQLHTQVPKWIDGTNLKISILFPFKSRDSISFDTVMASIGYEHPISQMIRENMTVEQKK
HHHHHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHH
KKEKLVSETERIVLQYRDEALAELIKLRKQPLDVSTEEIDTYSTCLDNMYNLRNEIENEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
INLANSSSSLEKSLRLVEPKDIENFLKLLNEYRETTNKFFYPYKKNPRIQQVNIDQPLPQ
HHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCEECCCCCCCCEEEECCCCCCHH
IFELKLRENHLNTSNTRARELEQKLAKTIPNSENGVKLLQNVQQKSYTVTPKARLVSEIL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCHHHHHHHHHH
KIKESPQNSSRPNSVPPIFSDSNYPENFEEILCGLNDQELRILSNSIAKLDLDAVVGSRE
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHH
EIINIILTIVGLLPSRELTTHRQYANRPINLEVSTMTESKNVEVEMNFNSQVIGATGKNE
HHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCEEEEECCCCEEEECCCCCC
GIININTSDRQILAEAAEEIQKLLRQLEKTNPSATELEQVAYVDVTVYPSHQATNHCCFK
CEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCEEC
GGRWNCN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA