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The map label for this gene is 113475374

Identifier: 113475374

GI number: 113475374

Start: 2579163

End: 2579600

Strand: Reverse

Name: 113475374

Synonym: Tery_1696

Alternate gene names: NA

Gene position: 2579600-2579163 (Counterclockwise)

Preceding gene: 113475375

Following gene: 113475372

Centisome position: 33.28

GC content: 41.78

Gene sequence:

>438_bases
ATGATGTCAGTGATTCACAAGCATTTTCTGAACTTGAGAAATGGAGTAGATGGGGAAATAGCCCAAGTATCAGGAGATGG
AGCAGAGCACAAGTATAGATGTTACGAGAAAGCTAACCAACTAGGAGCAAAAGTAACAATTCCACCCAGGAAAAATGCAG
TAATAGGTCAACACGGCAACTGCAAATGCCCACCTCATCCCAGAGATGAAAACCTCAGAAGAATCAGAAAGGTAGGACGC
CAAAAATGGAAGCATGAAAGTGGTTACCATCGGCGTTCTCTATCAGAAACCACAATGTTTAGACTCAAAGTGAGCTTTGG
AGGTCAGTTACGACGACGAAAATTCGAAAATCAAGCAGTAGAGTTGTTCATACAATGTGCCATGCTGAACCGTATGATTC
AAACAGGTAAACCCAAAAGTCACAAAGTGAAAATCTAG

Upstream 100 bases:

>100_bases
ACAAAAGTTCATGGTGTCAGTAAACGGCGTACATGGGGTAAATTACACCTAGGAGTAAATGAGGCTACAGGAGAGATTGT
CAGTGGAGTAGTGACTACCA

Downstream 100 bases:

>100_bases
TTAACTTCCTGATGGAAGTTTTTGGCGATTACTACTTTCATGCAACAAAGCCCTTCCCTTACTGTAACTATCTTTTGTGG
AGCGATCGCCAGCTCCACCA

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAEHKYRCYEKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI

Sequences:

>Translated_145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAEHKYRCYEKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI
>Mature_145_residues
MMSVIHKHFLNLRNGVDGEIAQVSGDGAEHKYRCYEKANQLGAKVTIPPRKNAVIGQHGNCKCPPHPRDENLRRIRKVGR
QKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAVELFIQCAMLNRMIQTGKPKSHKVKI

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 16772; Mature: 16772

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSVIHKHFLNLRNGVDGEIAQVSGDGAEHKYRCYEKANQLGAKVTIPPRKNAVIGQHGN
CHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCC
CKCPPHPRDENLRRIRKVGRQKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH
ELFIQCAMLNRMIQTGKPKSHKVKI
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMSVIHKHFLNLRNGVDGEIAQVSGDGAEHKYRCYEKANQLGAKVTIPPRKNAVIGQHGN
CHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEEECCCCC
CKCPPHPRDENLRRIRKVGRQKWKHESGYHRRSLSETTMFRLKVSFGGQLRRRKFENQAV
CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHH
ELFIQCAMLNRMIQTGKPKSHKVKI
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]