| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is tcmP [H]
Identifier: 113475372
GI number: 113475372
Start: 2574511
End: 2575359
Strand: Reverse
Name: tcmP [H]
Synonym: Tery_1692
Alternate gene names: 113475372
Gene position: 2575359-2574511 (Counterclockwise)
Preceding gene: 113475374
Following gene: 113475371
Centisome position: 33.23
GC content: 33.92
Gene sequence:
>849_bases ATGGCACTATCACAAATTAAATCTATGTTAACAGGTGTACCAGAGACGATGTTGGCAACTTTATACGGTAGAGCAGTAGA AGCAATGCGTGAAGACGCTATTATTAAAGATGAAAAAGCGATAGAAATTTATAATTCAATTGATTATGATTATGAGGCAA GTTTTGGAACTCTATGGCGGGCAATGTATACTGGCTTTGCTATTAGGTCAATTATTTTTGATCGAGAAATTAATAAATTT TTGAGTACATATCCTGATGGCACAATTGTAAATTTAGGAGAAGGCTTAGAAACACACCGTTTCCGAATTGCTAAGGAACA AGGGTTATGGTTGACGGTCGATGTTCCTGAAGCGATAAAAATCAGGGAGCAGTTCATTAAACCTGATCAAAGACATTTAC ATATCTCTATGTCAGCATTAGATAGTGGGTGGTTTGATTATGTACCGTTAGATAAACCAGTTTTTATAACTGCCCAAGGT TTATTTATGTATTTACCTCTAGAAGAGGTTAAGTTAATTATTCAAGATATTGCCAATACATTTAATCAAGGTTATTTAAT GTTTGATATTGTTCCTCATTGGGTATCACGCAAAACTATGTCAACCCAAGGTTGGAAACTAACTAAAAACTATACAGTTC CTCAAATGCCTTGGGGACTTAATGGTAACGAAGTACAATCAACCCTTAATAGTTGGTTAACAAATATAGAGGAAATAGTT GATATTGGTTATGATAACTATCCTCGTGGTGTAATGAAATGGTTATCTTTATTAATATTGTCTTTTACTCCTCTAAAAAA TATTCTCGCGTCATCGATCGTTAAATTGTCATTCCGAAATCAGAACTAA
Upstream 100 bases:
>100_bases GACTATAGTGAAGTTCGTCGAAGTTGTCATGCGCTATATATAGTGTCTTTGCGTAAGTCCTGATTTAATAAACACAAAAA TAGGCAAGTAATAAATAGAA
Downstream 100 bases:
>100_bases AAAAAATATCTTAAACAAACAACTGATTTTCGGTTCTCTGGTAAGTTGATATTAGAGTTGTTGGGAAATAACTTAGGAGA GAAAAAACTCAAACGAAAAC
Product: O-methyltransferase-like
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MALSQIKSMLTGVPETMLATLYGRAVEAMREDAIIKDEKAIEIYNSIDYDYEASFGTLWRAMYTGFAIRSIIFDREINKF LSTYPDGTIVNLGEGLETHRFRIAKEQGLWLTVDVPEAIKIREQFIKPDQRHLHISMSALDSGWFDYVPLDKPVFITAQG LFMYLPLEEVKLIIQDIANTFNQGYLMFDIVPHWVSRKTMSTQGWKLTKNYTVPQMPWGLNGNEVQSTLNSWLTNIEEIV DIGYDNYPRGVMKWLSLLILSFTPLKNILASSIVKLSFRNQN
Sequences:
>Translated_282_residues MALSQIKSMLTGVPETMLATLYGRAVEAMREDAIIKDEKAIEIYNSIDYDYEASFGTLWRAMYTGFAIRSIIFDREINKF LSTYPDGTIVNLGEGLETHRFRIAKEQGLWLTVDVPEAIKIREQFIKPDQRHLHISMSALDSGWFDYVPLDKPVFITAQG LFMYLPLEEVKLIIQDIANTFNQGYLMFDIVPHWVSRKTMSTQGWKLTKNYTVPQMPWGLNGNEVQSTLNSWLTNIEEIV DIGYDNYPRGVMKWLSLLILSFTPLKNILASSIVKLSFRNQN >Mature_281_residues ALSQIKSMLTGVPETMLATLYGRAVEAMREDAIIKDEKAIEIYNSIDYDYEASFGTLWRAMYTGFAIRSIIFDREINKFL STYPDGTIVNLGEGLETHRFRIAKEQGLWLTVDVPEAIKIREQFIKPDQRHLHISMSALDSGWFDYVPLDKPVFITAQGL FMYLPLEEVKLIIQDIANTFNQGYLMFDIVPHWVSRKTMSTQGWKLTKNYTVPQMPWGLNGNEVQSTLNSWLTNIEEIVD IGYDNYPRGVMKWLSLLILSFTPLKNILASSIVKLSFRNQN
Specific function: O-methyltransferase that catalyzes the methylation of the C-9 carboxy group of tetracenomycin E (TCM E) to yield TCM A2. Catalyzes as well the following side reactions:methylation of 8- O-methyl-TCM D3 to 9-carboxymethyl-8-O-methyl-TCM D3; and of TCM B3 t
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007213 - InterPro: IPR016874 [H]
Pfam domain/function: PF04072 LCM [H]
EC number: NA
Molecular weight: Translated: 32452; Mature: 32321
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSQIKSMLTGVPETMLATLYGRAVEAMREDAIIKDEKAIEIYNSIDYDYEASFGTLWR CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHH AMYTGFAIRSIIFDREINKFLSTYPDGTIVNLGEGLETHRFRIAKEQGLWLTVDVPEAIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHEEEEECCCCEEEEECCHHHH IREQFIKPDQRHLHISMSALDSGWFDYVPLDKPVFITAQGLFMYLPLEEVKLIIQDIANT HHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEEECCEEEEECHHHHHHHHHHHHHH FNQGYLMFDIVPHWVSRKTMSTQGWKLTKNYTVPQMPWGLNGNEVQSTLNSWLTNIEEIV HCCCEEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DIGYDNYPRGVMKWLSLLILSFTPLKNILASSIVKLSFRNQN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure ALSQIKSMLTGVPETMLATLYGRAVEAMREDAIIKDEKAIEIYNSIDYDYEASFGTLWR CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHH AMYTGFAIRSIIFDREINKFLSTYPDGTIVNLGEGLETHRFRIAKEQGLWLTVDVPEAIK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHEEEEECCCCEEEEECCHHHH IREQFIKPDQRHLHISMSALDSGWFDYVPLDKPVFITAQGLFMYLPLEEVKLIIQDIANT HHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCEEEEECCEEEEECHHHHHHHHHHHHHH FNQGYLMFDIVPHWVSRKTMSTQGWKLTKNYTVPQMPWGLNGNEVQSTLNSWLTNIEEIV HCCCEEEEEEHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH DIGYDNYPRGVMKWLSLLILSFTPLKNILASSIVKLSFRNQN HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8509339 [H]