Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475355

Identifier: 113475355

GI number: 113475355

Start: 2546360

End: 2547577

Strand: Direct

Name: 113475355

Synonym: Tery_1672

Alternate gene names: NA

Gene position: 2546360-2547577 (Clockwise)

Preceding gene: 113475353

Following gene: 113475358

Centisome position: 32.86

GC content: 29.23

Gene sequence:

>1218_bases
ATGGGTAATTATTTCCAATTCATTAAACCGAAAAAAATCAAATTTTTTTTATTATTAACATTTACATGGATAATTATACC
TCTACTATTGGTAGAAATTTTGATGATTTTTTTTGAACCATACCTATTTAAAGGGCTGTATCAATATGACCCAGATCTAG
GCTTTCGAGTGCGGCCTTATATGAATGGCAATAATCAATTTGGCTTCAACGACCGAGATTATCCTTTAGAAAAAAACCAA
AATAAATTTCGTCTGCTAGTTGTTAGTGACTCCTTTAATTGGGCAGGTGGAAAAGAAGGAAATTATACGGCTTTATTGGA
GAAAAAATTTGATAGTTATTTTGGTAAAAGTCAGGTAGAGGTAATTAATGTTGGCTATCCAGGAACTCATACTGGTGAGC
AACTAGCTATGTTGAAAAAGTTTGGATTACAATATAATCCAAACTTAGTAGTATTAGGCTTTTTTGTCGGTAATGATTTT
CAGGATGCTAACCCAAAAAGGAAACGCATTATTGTCAATGATATATATATAGATATAGATAAGAAAGACGAGTTAATTAT
TTTTGGTTATCCAATTATTGGTAAGTCTAGATTACTAATGTTTTTACAGCAAAAATATCAAGTTTACCAAAAATTACAAA
AGGGTAAACAGGATTCTGTAAAGTTACTAAGTAGTTCTCTAGCTCCTAGTTTAAATTTAGGATCAAATCTAATAATTGAC
AGGGAAAAATCTCCGGGAATTTTATCTAATAAAGCTTTTCTAAGAGTAGAAAAAAGCCGGCTTAAGTTTTGTAATATTAA
AGATTTAATTGATGGTAAATGGGATGAGAATATCAACTATATTTTTCACAGTATTTTAGAGATGCAAAAATTACTAAAAT
CTCGGAATATTGAATTTATAGTCGCTATTTATCCTGACGAATATCAAGTTAATGAGAAGTTATTAAATGAAATATTTGCA
GAGTATGATAATTTACAACGAGAGTTTTATAATTTGACTTGTCAGCAAGAAATTTTGAGCAAATTTTTAGAAGTTAATGG
CATCCCTTATATAGATATGTTGGATAGATTTAAAATCGAACAAAATACCCGTCATTTATACTTGCTTAGGGAACCCCATT
GGAATAGTGCTGGAAATTTATTAGCTGCAAATATTTTATTCAATCATTTAGTTAAAGATATAAATAAATTTTTTTTTGAA
AAACCTCTCTCCCTATAG

Upstream 100 bases:

>100_bases
CAGCAGGAAGCTTGAGACCTTATTGTTTTGGTCATCAGATTTTTAGTAATTTTGATTAGTATGTTATATTATCCCAGATT
TATAACTTAGTTGTCATTTT

Downstream 100 bases:

>100_bases
ATCCAGAGGTCGAATTAAACCAGGCTAATTTTTTCCATTCAATTTTTTGGTTTTGACGATTCATTTGGCTTAACTCTAAA
AGTTCTTTCCGTGATAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MGNYFQFIKPKKIKFFLLLTFTWIIIPLLLVEILMIFFEPYLFKGLYQYDPDLGFRVRPYMNGNNQFGFNDRDYPLEKNQ
NKFRLLVVSDSFNWAGGKEGNYTALLEKKFDSYFGKSQVEVINVGYPGTHTGEQLAMLKKFGLQYNPNLVVLGFFVGNDF
QDANPKRKRIIVNDIYIDIDKKDELIIFGYPIIGKSRLLMFLQQKYQVYQKLQKGKQDSVKLLSSSLAPSLNLGSNLIID
REKSPGILSNKAFLRVEKSRLKFCNIKDLIDGKWDENINYIFHSILEMQKLLKSRNIEFIVAIYPDEYQVNEKLLNEIFA
EYDNLQREFYNLTCQQEILSKFLEVNGIPYIDMLDRFKIEQNTRHLYLLREPHWNSAGNLLAANILFNHLVKDINKFFFE
KPLSL

Sequences:

>Translated_405_residues
MGNYFQFIKPKKIKFFLLLTFTWIIIPLLLVEILMIFFEPYLFKGLYQYDPDLGFRVRPYMNGNNQFGFNDRDYPLEKNQ
NKFRLLVVSDSFNWAGGKEGNYTALLEKKFDSYFGKSQVEVINVGYPGTHTGEQLAMLKKFGLQYNPNLVVLGFFVGNDF
QDANPKRKRIIVNDIYIDIDKKDELIIFGYPIIGKSRLLMFLQQKYQVYQKLQKGKQDSVKLLSSSLAPSLNLGSNLIID
REKSPGILSNKAFLRVEKSRLKFCNIKDLIDGKWDENINYIFHSILEMQKLLKSRNIEFIVAIYPDEYQVNEKLLNEIFA
EYDNLQREFYNLTCQQEILSKFLEVNGIPYIDMLDRFKIEQNTRHLYLLREPHWNSAGNLLAANILFNHLVKDINKFFFE
KPLSL
>Mature_404_residues
GNYFQFIKPKKIKFFLLLTFTWIIIPLLLVEILMIFFEPYLFKGLYQYDPDLGFRVRPYMNGNNQFGFNDRDYPLEKNQN
KFRLLVVSDSFNWAGGKEGNYTALLEKKFDSYFGKSQVEVINVGYPGTHTGEQLAMLKKFGLQYNPNLVVLGFFVGNDFQ
DANPKRKRIIVNDIYIDIDKKDELIIFGYPIIGKSRLLMFLQQKYQVYQKLQKGKQDSVKLLSSSLAPSLNLGSNLIIDR
EKSPGILSNKAFLRVEKSRLKFCNIKDLIDGKWDENINYIFHSILEMQKLLKSRNIEFIVAIYPDEYQVNEKLLNEIFAE
YDNLQREFYNLTCQQEILSKFLEVNGIPYIDMLDRFKIEQNTRHLYLLREPHWNSAGNLLAANILFNHLVKDINKFFFEK
PLSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47638; Mature: 47507

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNYFQFIKPKKIKFFLLLTFTWIIIPLLLVEILMIFFEPYLFKGLYQYDPDLGFRVRPY
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
MNGNNQFGFNDRDYPLEKNQNKFRLLVVSDSFNWAGGKEGNYTALLEKKFDSYFGKSQVE
ECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCEE
VINVGYPGTHTGEQLAMLKKFGLQYNPNLVVLGFFVGNDFQDANPKRKRIIVNDIYIDID
EEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEC
KKDELIIFGYPIIGKSRLLMFLQQKYQVYQKLQKGKQDSVKLLSSSLAPSLNLGSNLIID
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEE
REKSPGILSNKAFLRVEKSRLKFCNIKDLIDGKWDENINYIFHSILEMQKLLKSRNIEFI
CCCCCCEECCCEEEEEEHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
VAIYPDEYQVNEKLLNEIFAEYDNLQREFYNLTCQQEILSKFLEVNGIPYIDMLDRFKIE
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEC
QNTRHLYLLREPHWNSAGNLLAANILFNHLVKDINKFFFEKPLSL
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GNYFQFIKPKKIKFFLLLTFTWIIIPLLLVEILMIFFEPYLFKGLYQYDPDLGFRVRPY
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
MNGNNQFGFNDRDYPLEKNQNKFRLLVVSDSFNWAGGKEGNYTALLEKKFDSYFGKSQVE
ECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEHHHHHHHHHCCCCCEE
VINVGYPGTHTGEQLAMLKKFGLQYNPNLVVLGFFVGNDFQDANPKRKRIIVNDIYIDID
EEECCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEEEC
KKDELIIFGYPIIGKSRLLMFLQQKYQVYQKLQKGKQDSVKLLSSSLAPSLNLGSNLIID
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEE
REKSPGILSNKAFLRVEKSRLKFCNIKDLIDGKWDENINYIFHSILEMQKLLKSRNIEFI
CCCCCCEECCCEEEEEEHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
VAIYPDEYQVNEKLLNEIFAEYDNLQREFYNLTCQQEILSKFLEVNGIPYIDMLDRFKIE
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHEEC
QNTRHLYLLREPHWNSAGNLLAANILFNHLVKDINKFFFEKPLSL
CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA