The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is cysR [H]

Identifier: 113475346

GI number: 113475346

Start: 2529480

End: 2530019

Strand: Reverse

Name: cysR [H]

Synonym: Tery_1663

Alternate gene names: 113475346

Gene position: 2530019-2529480 (Counterclockwise)

Preceding gene: 113475347

Following gene: 113475343

Centisome position: 32.64

GC content: 32.04

Gene sequence:

>540_bases
ATGACTGCATCCCCTAAGTTGAGGCATCATCAATTTAAACGTCATCAACTCATGCCATTAACAGATATATTATTATGGCG
AATAGATACTGGAGTAGTTCGCACTTTAAGTAAAAATGAAGAAAAAAATGTTATTACTCTAGGATTTTGGGGTCAAGGAG
ATATTGTTGGTCAACCTCTATTTCCTTTTTATCCTTATCAAGTTCAATGCTTAACTATTGTGCAAGCAAGTATTTTACCA
AAGAGCTATTTTTATGCTCAAGAGGTAATGCTTTCTCATATTCAAAAAACTCAAGAACTATTAAGAATTATTCATTCTCG
AAAAATTAAATTACGACTGCTGAGATTATTAAAATGGTTAACAGATCGATTTGGGAATCAACTGCCAGAAGGGAAAATAC
TTAATATTCGCTTAACTCATCAAGAAATAGCTGAAATTATTTGTACTAGTCGTGTTACTGTTACGCGAATACTAAATGAG
TTGGAGAAGGAAAATAAAATTGGGTGGTCACAGAGTAACTATTTAATTCTTTTTAACTAG

Upstream 100 bases:

>100_bases
CAGCGGGAAGTACTGTAGCTGATGACTGACAGCTAAATACTTATAAAAATAATTATTATGCAACATAAACAGGAGAATAA
AAGTGACCTTAAATTCAGTA

Downstream 100 bases:

>100_bases
GGCTTGCTGGTTAATTCGCAAAGCATTGACACAAATTATGCTCATAGCCAACCAAATTTCGGGGTTTCTCAAAATACGAG
AAGTCGGTGACTCAAGCTCA

Product: CRP/FNR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTASPKLRHHQFKRHQLMPLTDILLWRIDTGVVRTLSKNEEKNVITLGFWGQGDIVGQPLFPFYPYQVQCLTIVQASILP
KSYFYAQEVMLSHIQKTQELLRIIHSRKIKLRLLRLLKWLTDRFGNQLPEGKILNIRLTHQEIAEIICTSRVTVTRILNE
LEKENKIGWSQSNYLILFN

Sequences:

>Translated_179_residues
MTASPKLRHHQFKRHQLMPLTDILLWRIDTGVVRTLSKNEEKNVITLGFWGQGDIVGQPLFPFYPYQVQCLTIVQASILP
KSYFYAQEVMLSHIQKTQELLRIIHSRKIKLRLLRLLKWLTDRFGNQLPEGKILNIRLTHQEIAEIICTSRVTVTRILNE
LEKENKIGWSQSNYLILFN
>Mature_178_residues
TASPKLRHHQFKRHQLMPLTDILLWRIDTGVVRTLSKNEEKNVITLGFWGQGDIVGQPLFPFYPYQVQCLTIVQASILPK
SYFYAQEVMLSHIQKTQELLRIIHSRKIKLRLLRLLKWLTDRFGNQLPEGKILNIRLTHQEIAEIICTSRVTVTRILNEL
EKENKIGWSQSNYLILFN

Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 21063; Mature: 20932

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASPKLRHHQFKRHQLMPLTDILLWRIDTGVVRTLSKNEEKNVITLGFWGQGDIVGQPL
CCCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
FPFYPYQVQCLTIVQASILPKSYFYAQEVMLSHIQKTQELLRIIHSRKIKLRLLRLLKWL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
TDRFGNQLPEGKILNIRLTHQEIAEIICTSRVTVTRILNELEKENKIGWSQSNYLILFN
HHHHCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure 
TASPKLRHHQFKRHQLMPLTDILLWRIDTGVVRTLSKNEEKNVITLGFWGQGDIVGQPL
CCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHCCCCCCCEEEEEECCCCCCCCCCC
FPFYPYQVQCLTIVQASILPKSYFYAQEVMLSHIQKTQELLRIIHSRKIKLRLLRLLKWL
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
TDRFGNQLPEGKILNIRLTHQEIAEIICTSRVTVTRILNELEKENKIGWSQSNYLILFN
HHHHCCCCCCCEEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1708375 [H]