| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475340
Identifier: 113475340
GI number: 113475340
Start: 2520035
End: 2520571
Strand: Reverse
Name: 113475340
Synonym: Tery_1655
Alternate gene names: NA
Gene position: 2520571-2520035 (Counterclockwise)
Preceding gene: 113475341
Following gene: 113475339
Centisome position: 32.52
GC content: 44.13
Gene sequence:
>537_bases ATGGAACAAACAAAGCAGAAAATTGAAAATTTGATGGAAGACATCCGCAAAACTCCACTTTTTCGCCAGCTCGTACCAAT GGAGGCGCAAAGCGGATGGCCAATTCCCCAACGCAAAGGTGGAAAAGTCTATGTCACCTTACCTTTTTTTGGTGCTCATA CCCAGAGCAAAGTTCAGACGGCTTTATTTCCACCGTTTGCCAAAATAACCTGGGATTGGTCTAACCAAATGATAGTCGAA TACCTCAACTTCCGCTATAGCAATCCTTGGCCGGAAGCAAATTGGGAAAAGGAGGTTGGTACTTTTCCTCATGCAGAAGT AGCCCAGATGACAGTGGGGGAATATCAAGAAAAGCGCAGGCGCTTGTTAGCTATGTATGAGGAAATGCTTGAGAAACTGG CTCAAGGGAAATCTTTTTCTCCACAATGGAAAGAAGGATTTAGCCAGCTTTTGCGGACTTTGATGGAACCTTCCCTGGAG CCGTATTATCGCGTTCTAGGCTCAAAGTTTTTTGACCACTTCTTAACCAAAAACTAA
Upstream 100 bases:
>100_bases GGGTGGAACGATAAAAGCCGTCGGCGGTACCGATATTATTAGCGTTGGTTATTATTTATTTGGCATATTGGGAGGAGTCT AAAACCTAAGCACGAAAATC
Downstream 100 bases:
>100_bases TTAATTTTTGCGAGGAAAGTATGCCTACCTACCAAGCACGATATCAGGAACAGAAGCAGCAGACCCTAAAGCTGTTGCAA TCAGCAATATCCTTTGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE PYYRVLGSKFFDHFLTKN
Sequences:
>Translated_178_residues MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE PYYRVLGSKFFDHFLTKN >Mature_178_residues MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE PYYRVLGSKFFDHFLTKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21075; Mature: 21075
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQT CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH ALFPPFAKITWDWSNQMIVEYLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRR HHCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH RLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLEPYYRVLGSKFFDHFLTKN HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQT CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH ALFPPFAKITWDWSNQMIVEYLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRR HHCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH RLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLEPYYRVLGSKFFDHFLTKN HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA