The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475340

Identifier: 113475340

GI number: 113475340

Start: 2520035

End: 2520571

Strand: Reverse

Name: 113475340

Synonym: Tery_1655

Alternate gene names: NA

Gene position: 2520571-2520035 (Counterclockwise)

Preceding gene: 113475341

Following gene: 113475339

Centisome position: 32.52

GC content: 44.13

Gene sequence:

>537_bases
ATGGAACAAACAAAGCAGAAAATTGAAAATTTGATGGAAGACATCCGCAAAACTCCACTTTTTCGCCAGCTCGTACCAAT
GGAGGCGCAAAGCGGATGGCCAATTCCCCAACGCAAAGGTGGAAAAGTCTATGTCACCTTACCTTTTTTTGGTGCTCATA
CCCAGAGCAAAGTTCAGACGGCTTTATTTCCACCGTTTGCCAAAATAACCTGGGATTGGTCTAACCAAATGATAGTCGAA
TACCTCAACTTCCGCTATAGCAATCCTTGGCCGGAAGCAAATTGGGAAAAGGAGGTTGGTACTTTTCCTCATGCAGAAGT
AGCCCAGATGACAGTGGGGGAATATCAAGAAAAGCGCAGGCGCTTGTTAGCTATGTATGAGGAAATGCTTGAGAAACTGG
CTCAAGGGAAATCTTTTTCTCCACAATGGAAAGAAGGATTTAGCCAGCTTTTGCGGACTTTGATGGAACCTTCCCTGGAG
CCGTATTATCGCGTTCTAGGCTCAAAGTTTTTTGACCACTTCTTAACCAAAAACTAA

Upstream 100 bases:

>100_bases
GGGTGGAACGATAAAAGCCGTCGGCGGTACCGATATTATTAGCGTTGGTTATTATTTATTTGGCATATTGGGAGGAGTCT
AAAACCTAAGCACGAAAATC

Downstream 100 bases:

>100_bases
TTAATTTTTGCGAGGAAAGTATGCCTACCTACCAAGCACGATATCAGGAACAGAAGCAGCAGACCCTAAAGCTGTTGCAA
TCAGCAATATCCTTTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE
YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE
PYYRVLGSKFFDHFLTKN

Sequences:

>Translated_178_residues
MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE
YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE
PYYRVLGSKFFDHFLTKN
>Mature_178_residues
MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQTALFPPFAKITWDWSNQMIVE
YLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRRRLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLE
PYYRVLGSKFFDHFLTKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21075; Mature: 21075

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQT
CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
ALFPPFAKITWDWSNQMIVEYLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRR
HHCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
RLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLEPYYRVLGSKFFDHFLTKN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEQTKQKIENLMEDIRKTPLFRQLVPMEAQSGWPIPQRKGGKVYVTLPFFGAHTQSKVQT
CCHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHH
ALFPPFAKITWDWSNQMIVEYLNFRYSNPWPEANWEKEVGTFPHAEVAQMTVGEYQEKRR
HHCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHH
RLLAMYEEMLEKLAQGKSFSPQWKEGFSQLLRTLMEPSLEPYYRVLGSKFFDHFLTKN
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA