| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is iniA [H]
Identifier: 113475339
GI number: 113475339
Start: 2517954
End: 2520014
Strand: Reverse
Name: iniA [H]
Synonym: Tery_1654
Alternate gene names: 113475339
Gene position: 2520014-2517954 (Counterclockwise)
Preceding gene: 113475340
Following gene: 113475338
Centisome position: 32.52
GC content: 44.44
Gene sequence:
>2061_bases ATGCCTACCTACCAAGCACGATATCAGGAACAGAAGCAGCAGACCCTAAAGCTGTTGCAATCAGCAATATCCTTTGCCAA AACCTATAAATACAGAGATATAGAGCGGCGTCTGGGCGAAGCTCAAAAACGTCTACTTGAGGGTAAGTTGCTGGTTGTAG TCTGCGGTGAGTTCAAGGAAGGAAAATCTAGCTTGATTAATGCACTTCTCAAGGAAGCCAATGACGACTTATTCCCGGTA GATGCTGATATTGCCACCGGTATTGTATCCACGATCGCTTACGGAGAAAGGGAACAAATTACGGTTATCCTGGGAAAACC AGGTAAAGAAAAGAAAGAGAAAATTCAACGCCAGGAAATAGGCAATTATGCTAACGAGAAATTCAATAAAGGAAACAAGC GTCAAGCTCGGATGCTGGTTATAGAATCGCCTAACCAAAAACTGAAGGATGGTTTAGTATTGGTGGATACGCCTGGCGTG GGGGGACTCAATACCCAACATACGGGAATTACTTACAGTTTCATCCCCGAAGCCGATGCCATCCTTTTTGTTAGCGATGT CAAAAACCCTCTGTCAGAAGACGAACTCAAATTTCTGAAATTTATTGTCGATCGCTGTCCTAATGTTATTTCCAACGTTA TCTTCGTTGTTACCAAAATAGATTCTAAAGCAGACTACCAAACTATCGTGGCGAATAACAGGGAAAAACTAGCCCAAGTG CTACAGCGTCCTGGCAATGAAATTCCGATCGTCCCTGTATCTAGCCACAACTACCTTGACTACTTAAAGCATGAAGATGA GGAAGACTTAGAGGATAGCAACTTCATAGCATTAGAGTCAGAATTGGGGAAACTACTCACCCAAGAGAAGGGCTACATTT TGCTGATCCGTGCTCTGGGAGAACTGGGACCAGCTTTAAGGGATATGAAAATGCCGATCCAGGCTGAATTGTCAACTTGC CAGCAACAAAGCAAAGAAGAGATTGATAAGCTGGAAAGCCAGTTCCAGAATGAAAAGCAACGCTTTCAAGATCTCCAAAA TGACAACACCAACTGGCAAAAGCAGTTAAGTCGCGGTATCGAAGATATCAGCATGGAATTGTCCGCTCAATTGCGCAGTG GCTTTACCAAAGTTCAGGGGTGGGCAAATGACTATATGAAAGATAGCAAATTGTTAGAGAAACCAGCGGAGATTGCTAAG TTGGTCGAGCGGGATATTGATACCCTGATGTCTGACATAGGAAAGCAAGTTAGCAGCAAAGCAGCCAGCTTGCATTACCA AATTGAGACATCAAGTGGATTGGAGCTTGGTATCTCTAATCTTGACTCTTTAGACTGGGAAAAAACTGAACTATCAACAG ATAGCATAGAGATTAAGAAGTCAGGATGGTGGGAAAAAACCCTGAGCGTAACGCGCAGTGGGATGTTTAATGCTACGGCC GGGGGAACTCTTGCTAGTGCGGTAGGAGGAGCAGTTGGTGCAGGTATCGGCTTTCTGTTTGGTGGTGTGGGAGCCGGGCC CGGAGCTGTTATTGGTTCGTCAATTGGTGCTGCAATTGGTGGAATAGCGGGACTTACATCTGGAGTAGTACAAGGAGTAT CCCAAGTTAAGAAACAGGATACAGCTGCCGCTCAAAGAGAAATCAACCCGCACATCCAGCAGTTTATCAGAGAAAGTCAA GAGCTTTGTCAACAGTCTTTGAATAAAACTGTTATACAATTAAAGCGGGCGATGACAGATGATTTGAGCGAAAAGATCGG ACAGTTAAAGCAAAATTGCGATCGCACGTTACGTTCTATTCAGGAAACTCGCAAGCTCACCGAGCGAGAGAAGCAAGAAA AACTCAAGCAGCTAGCAATTCCTTTGCAGCAACTCAACAAACTCTACAACAGCGTCGAAAATCTAGCCAATGCCACAATT TCCCAAAAGGAAACTGTCGTTCAGACCGAAACTATGGCAAATTTTCAACCAAAATCGGATGGGGATTCGCAGGTGTTGGA AGCAAGTCAAATCGACGAACCGAGCAATGCTGATTATGGAGAGGACTGGGCAGATGGATAA
Upstream 100 bases:
>100_bases CTTTGATGGAACCTTCCCTGGAGCCGTATTATCGCGTTCTAGGCTCAAAGTTTTTTGACCACTTCTTAACCAAAAACTAA TTAATTTTTGCGAGGAAAGT
Downstream 100 bases:
>100_bases TCGGGCATTACGCGATCGCGCTGAAGAGGTATTTCAGTTTGCTCTTGGTTGCACCATGAATCGCCCCAAGTTGCAGAACC TATACCGAAAGATTGATCAG
Product: dynamin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MPTYQARYQEQKQQTLKLLQSAISFAKTYKYRDIERRLGEAQKRLLEGKLLVVVCGEFKEGKSSLINALLKEANDDLFPV DADIATGIVSTIAYGEREQITVILGKPGKEKKEKIQRQEIGNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGV GGLNTQHTGITYSFIPEADAILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQTIVANNREKLAQV LQRPGNEIPIVPVSSHNYLDYLKHEDEEDLEDSNFIALESELGKLLTQEKGYILLIRALGELGPALRDMKMPIQAELSTC QQQSKEEIDKLESQFQNEKQRFQDLQNDNTNWQKQLSRGIEDISMELSAQLRSGFTKVQGWANDYMKDSKLLEKPAEIAK LVERDIDTLMSDIGKQVSSKAASLHYQIETSSGLELGISNLDSLDWEKTELSTDSIEIKKSGWWEKTLSVTRSGMFNATA GGTLASAVGGAVGAGIGFLFGGVGAGPGAVIGSSIGAAIGGIAGLTSGVVQGVSQVKKQDTAAAQREINPHIQQFIRESQ ELCQQSLNKTVIQLKRAMTDDLSEKIGQLKQNCDRTLRSIQETRKLTEREKQEKLKQLAIPLQQLNKLYNSVENLANATI SQKETVVQTETMANFQPKSDGDSQVLEASQIDEPSNADYGEDWADG
Sequences:
>Translated_686_residues MPTYQARYQEQKQQTLKLLQSAISFAKTYKYRDIERRLGEAQKRLLEGKLLVVVCGEFKEGKSSLINALLKEANDDLFPV DADIATGIVSTIAYGEREQITVILGKPGKEKKEKIQRQEIGNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGV GGLNTQHTGITYSFIPEADAILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQTIVANNREKLAQV LQRPGNEIPIVPVSSHNYLDYLKHEDEEDLEDSNFIALESELGKLLTQEKGYILLIRALGELGPALRDMKMPIQAELSTC QQQSKEEIDKLESQFQNEKQRFQDLQNDNTNWQKQLSRGIEDISMELSAQLRSGFTKVQGWANDYMKDSKLLEKPAEIAK LVERDIDTLMSDIGKQVSSKAASLHYQIETSSGLELGISNLDSLDWEKTELSTDSIEIKKSGWWEKTLSVTRSGMFNATA GGTLASAVGGAVGAGIGFLFGGVGAGPGAVIGSSIGAAIGGIAGLTSGVVQGVSQVKKQDTAAAQREINPHIQQFIRESQ ELCQQSLNKTVIQLKRAMTDDLSEKIGQLKQNCDRTLRSIQETRKLTEREKQEKLKQLAIPLQQLNKLYNSVENLANATI SQKETVVQTETMANFQPKSDGDSQVLEASQIDEPSNADYGEDWADG >Mature_685_residues PTYQARYQEQKQQTLKLLQSAISFAKTYKYRDIERRLGEAQKRLLEGKLLVVVCGEFKEGKSSLINALLKEANDDLFPVD ADIATGIVSTIAYGEREQITVILGKPGKEKKEKIQRQEIGNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGVG GLNTQHTGITYSFIPEADAILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQTIVANNREKLAQVL QRPGNEIPIVPVSSHNYLDYLKHEDEEDLEDSNFIALESELGKLLTQEKGYILLIRALGELGPALRDMKMPIQAELSTCQ QQSKEEIDKLESQFQNEKQRFQDLQNDNTNWQKQLSRGIEDISMELSAQLRSGFTKVQGWANDYMKDSKLLEKPAEIAKL VERDIDTLMSDIGKQVSSKAASLHYQIETSSGLELGISNLDSLDWEKTELSTDSIEIKKSGWWEKTLSVTRSGMFNATAG GTLASAVGGAVGAGIGFLFGGVGAGPGAVIGSSIGAAIGGIAGLTSGVVQGVSQVKKQDTAAAQREINPHIQQFIRESQE LCQQSLNKTVIQLKRAMTDDLSEKIGQLKQNCDRTLRSIQETRKLTEREKQEKLKQLAIPLQQLNKLYNSVENLANATIS QKETVVQTETMANFQPKSDGDSQVLEASQIDEPSNADYGEDWADG
Specific function: Participates in the development of tolerance to both isoniazid and ethambutol. May function through a MDR-pump like mechanism, although it does not appear to directly transport isoniazid from the cell [H]
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001401 [H]
Pfam domain/function: PF00350 Dynamin_N [H]
EC number: NA
Molecular weight: Translated: 76026; Mature: 75895
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTYQARYQEQKQQTLKLLQSAISFAKTYKYRDIERRLGEAQKRLLEGKLLVVVCGEFKE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GKSSLINALLKEANDDLFPVDADIATGIVSTIAYGEREQITVILGKPGKEKKEKIQRQEI CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH GNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGVGGLNTQHTGITYSFIPEADA HHHHHHHCCCCCCCEEEEEEEECCCHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCC ILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQTIVANNREKLAQV EEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCHHHHHHCCHHHHHHH LQRPGNEIPIVPVSSHNYLDYLKHEDEEDLEDSNFIALESELGKLLTQEKGYILLIRALG HHCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEHHHHH ELGPALRDMKMPIQAELSTCQQQSKEEIDKLESQFQNEKQRFQDLQNDNTNWQKQLSRGI HHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCH EDISMELSAQLRSGFTKVQGWANDYMKDSKLLEKPAEIAKLVERDIDTLMSDIGKQVSSK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASLHYQIETSSGLELGISNLDSLDWEKTELSTDSIEIKKSGWWEKTLSVTRSGMFNATA HHHEEEEEECCCCCHHCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCC GGTLASAVGGAVGAGIGFLFGGVGAGPGAVIGSSIGAAIGGIAGLTSGVVQGVSQVKKQD CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAAQREINPHIQQFIRESQELCQQSLNKTVIQLKRAMTDDLSEKIGQLKQNCDRTLRSI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QETRKLTEREKQEKLKQLAIPLQQLNKLYNSVENLANATISQKETVVQTETMANFQPKSD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDSQVLEASQIDEPSNADYGEDWADG CHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PTYQARYQEQKQQTLKLLQSAISFAKTYKYRDIERRLGEAQKRLLEGKLLVVVCGEFKE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCC GKSSLINALLKEANDDLFPVDADIATGIVSTIAYGEREQITVILGKPGKEKKEKIQRQEI CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHH GNYANEKFNKGNKRQARMLVIESPNQKLKDGLVLVDTPGVGGLNTQHTGITYSFIPEADA HHHHHHHCCCCCCCEEEEEEEECCCHHHHCCEEEEECCCCCCCCCCCCCEEEEECCCCCC ILFVSDVKNPLSEDELKFLKFIVDRCPNVISNVIFVVTKIDSKADYQTIVANNREKLAQV EEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEHEECCCCCCHHHHHHCCHHHHHHH LQRPGNEIPIVPVSSHNYLDYLKHEDEEDLEDSNFIALESELGKLLTQEKGYILLIRALG HHCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCEEEHHHHH ELGPALRDMKMPIQAELSTCQQQSKEEIDKLESQFQNEKQRFQDLQNDNTNWQKQLSRGI HHCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCH EDISMELSAQLRSGFTKVQGWANDYMKDSKLLEKPAEIAKLVERDIDTLMSDIGKQVSSK HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AASLHYQIETSSGLELGISNLDSLDWEKTELSTDSIEIKKSGWWEKTLSVTRSGMFNATA HHHEEEEEECCCCCHHCCCCCCCCCCCHHHCCCCCEEECCCCCHHHHHHHHHCCCCCCCC GGTLASAVGGAVGAGIGFLFGGVGAGPGAVIGSSIGAAIGGIAGLTSGVVQGVSQVKKQD CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAAAQREINPHIQQFIRESQELCQQSLNKTVIQLKRAMTDDLSEKIGQLKQNCDRTLRSI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QETRKLTEREKQEKLKQLAIPLQQLNKLYNSVENLANATISQKETVVQTETMANFQPKSD HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GDSQVLEASQIDEPSNADYGEDWADG CHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]