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The map label for this gene is iniC [H]

Identifier: 113475338

GI number: 113475338

Start: 2516387

End: 2517961

Strand: Reverse

Name: iniC [H]

Synonym: Tery_1653

Alternate gene names: 113475338

Gene position: 2517961-2516387 (Counterclockwise)

Preceding gene: 113475339

Following gene: 113475337

Centisome position: 32.49

GC content: 45.97

Gene sequence:

>1575_bases
ATGGATAATCGGGCATTACGCGATCGCGCTGAAGAGGTATTTCAGTTTGCTCTTGGTTGCACCATGAATCGCCCCAAGTT
GCAGAACCTATACCGAAAGATTGATCAGTGTTACCAGCAGTTAGATTTACCAATGCGAGTAGCGATAGTTGGCATGATAA
AAGCTGGGAAATCTACAATGATGAATGCTCTTCTGGGGGAAAAAATAGTAGCTACCGGCACGGTAGAAGCTACATTCAAC
GTCAACTGGCTGAAATATGGTGAATCCAAATCTCTGCTAGTCCATTACAAAAATGGCTCTCCGCCAGAACCGAAATCGTT
TGAAGAACTGGAAGATCTAACCCTACGGGCTGAAGCTAACAGCGATTCCTTCAACTACTTACTGAGCATTAAGTACATTG
AGTTATCTTATCCCAACCCTATCCTGAAGAAATTTAACCTAATAGATACCCCGGGTTTGGCGTCAGCTTACGAAGCTGAT
TCAGAAAACACCAAAAACTTCCTGCAATTGCACGGTCAGGAACTAACGCAAGCAACCCAGGAAGAAGCTTCTAATGCTGA
TGCCGTAATATACCTATTCGCTAAAAGCTTCTCTGAATCTAGCCAAAACACAATGGCTGAGTTTCAAGGTGCTGCATTCG
GACAAGCAACGCCAATTAATGCAATTGGAGTACTGACTAAAGTAGATGATTACTGGTCGGACGGTGAAGAACCGATTCTC
AAAGGTCGTGAAATCACAGAGCGATTGCAGTCCGAACATTTGCGCGGCGCGCTTTATACCACACTGCCGGTATGCGGTCT
TCTGGCTTTTGGAGCGCAAACCCTAACTCCAGAAGAGTTTGATACCCTAATGCAGCTAGCTGCACTGCCGGAAAGTAGAC
TTCGGAGTCTGGTCAAAAATGCCACGCGACTTAGGGAGCGCGAGTATCCAAAAGAGCCAGAGATACCGCCCGCAGATAAG
AGAAAATTGGTACTAGACCGACTTGGACAATACGGAATCTGGTTGGCTGCCAATCTTATCCGCAGTGGAACTAGAGAAAA
GGAATTGCTAGCTCGGAAACTATTCCAGCGAAGTGGCGCATCAGAACTACTAGACTTGATTAAATCCCACTTTGGCAACC
GCGCTTTCCTGATTAAGTTGAGCGTTGCATTGCAACAAATCAAAGCAGCTTGTTTCATGGAAAAACAGCGTTTAGAGGGT
GCAGATTTTCAGATGGTCGCCGACATAGCAGGAGAGTTTGAAAGGCTGGAGGTTGAGGAACAAGGCTTTCAGCAGTTGGC
AGTATTACACAGTTATTACCAGGGCGAGCTCGGTTTTAACAAGGATGAGGTTAGACAACTTCAAGCAGTGACCGGTGAAA
ACGGAACCTCCCTAAAAGCACGACTTGAGCTTGGTGAAAATGCCACTGATGCCGAGATGACTCATGTCGCCCAACAACGA
GTACAGTCTTGGAGACAGAGAGCCAATGACTATATGAGTGCTGACAGCCAGACCATTGAGGCAGCTACTGTAATAGCCCA
TTCCTACGAACAAATACTCTATCAAATTGCACAACAGGAGGACTCCTATGCTTAA

Upstream 100 bases:

>100_bases
ATGGCAAATTTTCAACCAAAATCGGATGGGGATTCGCAGGTGTTGGAAGCAAGTCAAATCGACGAACCGAGCAATGCTGA
TTATGGAGAGGACTGGGCAG

Downstream 100 bases:

>100_bases
CGATTTTTCCATATTTAATATTTTCTGCCCCTGGATGGCGCAACAGCAACAAGCAAAAGAAGAGGCTATAAAAACTGAAG
CAAATGCACGAAAGTTGAAC

Product: HSR1-related GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 524

Protein sequence:

>524_residues
MDNRALRDRAEEVFQFALGCTMNRPKLQNLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTMMNALLGEKIVATGTVEATFN
VNWLKYGESKSLLVHYKNGSPPEPKSFEELEDLTLRAEANSDSFNYLLSIKYIELSYPNPILKKFNLIDTPGLASAYEAD
SENTKNFLQLHGQELTQATQEEASNADAVIYLFAKSFSESSQNTMAEFQGAAFGQATPINAIGVLTKVDDYWSDGEEPIL
KGREITERLQSEHLRGALYTTLPVCGLLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKNATRLREREYPKEPEIPPADK
RKLVLDRLGQYGIWLAANLIRSGTREKELLARKLFQRSGASELLDLIKSHFGNRAFLIKLSVALQQIKAACFMEKQRLEG
ADFQMVADIAGEFERLEVEEQGFQQLAVLHSYYQGELGFNKDEVRQLQAVTGENGTSLKARLELGENATDAEMTHVAQQR
VQSWRQRANDYMSADSQTIEAATVIAHSYEQILYQIAQQEDSYA

Sequences:

>Translated_524_residues
MDNRALRDRAEEVFQFALGCTMNRPKLQNLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTMMNALLGEKIVATGTVEATFN
VNWLKYGESKSLLVHYKNGSPPEPKSFEELEDLTLRAEANSDSFNYLLSIKYIELSYPNPILKKFNLIDTPGLASAYEAD
SENTKNFLQLHGQELTQATQEEASNADAVIYLFAKSFSESSQNTMAEFQGAAFGQATPINAIGVLTKVDDYWSDGEEPIL
KGREITERLQSEHLRGALYTTLPVCGLLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKNATRLREREYPKEPEIPPADK
RKLVLDRLGQYGIWLAANLIRSGTREKELLARKLFQRSGASELLDLIKSHFGNRAFLIKLSVALQQIKAACFMEKQRLEG
ADFQMVADIAGEFERLEVEEQGFQQLAVLHSYYQGELGFNKDEVRQLQAVTGENGTSLKARLELGENATDAEMTHVAQQR
VQSWRQRANDYMSADSQTIEAATVIAHSYEQILYQIAQQEDSYA
>Mature_524_residues
MDNRALRDRAEEVFQFALGCTMNRPKLQNLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTMMNALLGEKIVATGTVEATFN
VNWLKYGESKSLLVHYKNGSPPEPKSFEELEDLTLRAEANSDSFNYLLSIKYIELSYPNPILKKFNLIDTPGLASAYEAD
SENTKNFLQLHGQELTQATQEEASNADAVIYLFAKSFSESSQNTMAEFQGAAFGQATPINAIGVLTKVDDYWSDGEEPIL
KGREITERLQSEHLRGALYTTLPVCGLLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKNATRLREREYPKEPEIPPADK
RKLVLDRLGQYGIWLAANLIRSGTREKELLARKLFQRSGASELLDLIKSHFGNRAFLIKLSVALQQIKAACFMEKQRLEG
ADFQMVADIAGEFERLEVEEQGFQQLAVLHSYYQGELGFNKDEVRQLQAVTGENGTSLKARLELGENATDAEMTHVAQQR
VQSWRQRANDYMSADSQTIEAATVIAHSYEQILYQIAQQEDSYA

Specific function: Unknown

COG id: COG0699

COG function: function code R; Predicted GTPases (dynamin-related)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001401 [H]

Pfam domain/function: PF00350 Dynamin_N [H]

EC number: NA

Molecular weight: Translated: 58973; Mature: 58973

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00037 MYB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRALRDRAEEVFQFALGCTMNRPKLQNLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTM
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
MNALLGEKIVATGTVEATFNVNWLKYGESKSLLVHYKNGSPPEPKSFEELEDLTLRAEAN
HHHHHCCHHEECCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHEEEECCC
SDSFNYLLSIKYIELSYPNPILKKFNLIDTPGLASAYEADSENTKNFLQLHGQELTQATQ
CCCCEEEEEEEEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHH
EEASNADAVIYLFAKSFSESSQNTMAEFQGAAFGQATPINAIGVLTKVDDYWSDGEEPIL
HHCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
KGREITERLQSEHLRGALYTTLPVCGLLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ATRLREREYPKEPEIPPADKRKLVLDRLGQYGIWLAANLIRSGTREKELLARKLFQRSGA
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
SELLDLIKSHFGNRAFLIKLSVALQQIKAACFMEKQRLEGADFQMVADIAGEFERLEVEE
HHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QGFQQLAVLHSYYQGELGFNKDEVRQLQAVTGENGTSLKARLELGENATDAEMTHVAQQR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
VQSWRQRANDYMSADSQTIEAATVIAHSYEQILYQIAQQEDSYA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDNRALRDRAEEVFQFALGCTMNRPKLQNLYRKIDQCYQQLDLPMRVAIVGMIKAGKSTM
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
MNALLGEKIVATGTVEATFNVNWLKYGESKSLLVHYKNGSPPEPKSFEELEDLTLRAEAN
HHHHHCCHHEECCEEEEEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHEEEECCC
SDSFNYLLSIKYIELSYPNPILKKFNLIDTPGLASAYEADSENTKNFLQLHGQELTQATQ
CCCCEEEEEEEEEEEECCCHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHCCHHHHHHHH
EEASNADAVIYLFAKSFSESSQNTMAEFQGAAFGQATPINAIGVLTKVDDYWSDGEEPIL
HHCCCCCEEEEEEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
KGREITERLQSEHLRGALYTTLPVCGLLAFGAQTLTPEEFDTLMQLAALPESRLRSLVKN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
ATRLREREYPKEPEIPPADKRKLVLDRLGQYGIWLAANLIRSGTREKELLARKLFQRSGA
HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCH
SELLDLIKSHFGNRAFLIKLSVALQQIKAACFMEKQRLEGADFQMVADIAGEFERLEVEE
HHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
QGFQQLAVLHSYYQGELGFNKDEVRQLQAVTGENGTSLKARLELGENATDAEMTHVAQQR
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
VQSWRQRANDYMSADSQTIEAATVIAHSYEQILYQIAQQEDSYA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]