| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475310
Identifier: 113475310
GI number: 113475310
Start: 2473082
End: 2473654
Strand: Direct
Name: 113475310
Synonym: Tery_1619
Alternate gene names: NA
Gene position: 2473082-2473654 (Clockwise)
Preceding gene: 113475309
Following gene: 113475311
Centisome position: 31.91
GC content: 33.86
Gene sequence:
>573_bases ATGAATGATATTGATATTGATATTTATGTTTATGTTATCATCGGGCTTTTACCATTGGCCGCCTTGATACTGGTACTTCA AGTTAATCCTTATAATGGTCTTATTATCCGAGCCATTTTAGGAGAAATAGCAGCATTAGTTTATGCACTTTTGGGTGCTG CGGATGTAGCTTTAACGGAAGCTTTAGTTGCAACAATGTTAGCTGTCAGCCTTTATGTGATTACAGTTCGTTCTTCTTTA GTAATGCGTTTGGGAATACTTAAAGAAGTTGAGGCAGAAACAGAAAGTTATATGAAGGAAGTTGTCGATAATATGAGAAA AATTATTGATAAATATCATTTGCGTTTGGAATTAGTCGAATATCCAACTCAACAAGCTTTAGAAGGAGGGTTACGATCCA AAGAAGTTCATACTATTTTTGGCAAACCAGATGAATTAAAACTAGAGGGCAAACAAACTTATCAGACTACTACTAGAGTG TATCGTCTATTTGAAATTATGGAAAAGGAACTAACTTTATCAGAAACAACTGTGAGATATATAAATGTCAGTAACTTGGA GGAAAAAGATTAA
Upstream 100 bases:
>100_bases TTTATAGCCGGGCTAAAGCCTAGGACAGAAAAAGGCTTATAGTAGCTCTTCTGGAGGATGCATATAATATTTCTTAATGA TTATTTCTTGACTAATACCA
Downstream 100 bases:
>100_bases TGAAATTGGTTTATTTTTTAGCGGGAGTAGCATTGTTTATAACAGTGCTATTTATACCTAACCCAATGGGAGAATGGGAT AGAATACCTATTGTTGAATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV YRLFEIMEKELTLSETTVRYINVSNLEEKD
Sequences:
>Translated_190_residues MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV YRLFEIMEKELTLSETTVRYINVSNLEEKD >Mature_190_residues MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTEALVATMLAVSLYVITVRSSL VMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVEYPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRV YRLFEIMEKELTLSETTVRYINVSNLEEKD
Specific function: Unknown
COG id: COG1563
COG function: function code P; Predicted subunit of the Multisubunit Na+/H+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21466; Mature: 21466
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVATMLAVSLYVITVRSSLVMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRVYRLFEIMEKELTLSETTVRY CCHHHHHHCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE INVSNLEEKD EECCCCCCCC >Mature Secondary Structure MNDIDIDIYVYVIIGLLPLAALILVLQVNPYNGLIIRAILGEIAALVYALLGAADVALTE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVATMLAVSLYVITVRSSLVMRLGILKEVEAETESYMKEVVDNMRKIIDKYHLRLELVE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YPTQQALEGGLRSKEVHTIFGKPDELKLEGKQTYQTTTRVYRLFEIMEKELTLSETTVRY CCHHHHHHCCCCCCCCCEECCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE INVSNLEEKD EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA