| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475305
Identifier: 113475305
GI number: 113475305
Start: 2469851
End: 2470195
Strand: Direct
Name: 113475305
Synonym: Tery_1614
Alternate gene names: NA
Gene position: 2469851-2470195 (Clockwise)
Preceding gene: 113475304
Following gene: 113475306
Centisome position: 31.87
GC content: 35.07
Gene sequence:
>345_bases ATGTTAAGATTAGAAGCTTTGATACTTTTCACCGTATTATGTGGATTTTTCGGCATTATATTTAAGAAAAATTTGGTGAT GAAAGTCATGTCAATGGATATTATGAGTACAGGGGTTATTGCTTATTATGTGTTGGTGGCATCACGAGATGGTGTATTCA CTCCTATTATAAGTGAAAGGGAAAATGTTGTTGCTTATTCGGATCCTGTGCCTCAAGCGGTTATATTAACTGCCATTGTT ATTGGTTTTTCAATTCAAGCTTTAATGCTGGTGGGTGTGATCAAGTTGTCAAAGGATAATCCTACTCTAGAAGCTAATGT GATCGAAAAAAACAATCTGCCATAA
Upstream 100 bases:
>100_bases TGACAATTTGCTAAAGTCTTATTAATAGATTATTTGGTTATATTGCCTTGTAAGATATAAATATTTAAACCAATTATTAA CTACTAAATACTGAAATTAT
Downstream 100 bases:
>100_bases CAATTGATAACTAAAGTGACCAATATGACAATTGCTTGGATGGCGTTGCCATTTTTTTGTGGGGTTAGTTATCTATCTAC ATATCCAAACTTTATGGCTT
Product: putative monovalent cation/H+ antiporter subunit C
Products: NA
Alternate protein names: NADH-Ubiquinone Oxidoreductase Chain 4L; NADH-Ubiquinone Oxidoreductase Chain 4l
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MLRLEALILFTVLCGFFGIIFKKNLVMKVMSMDIMSTGVIAYYVLVASRDGVFTPIISERENVVAYSDPVPQAVILTAIV IGFSIQALMLVGVIKLSKDNPTLEANVIEKNNLP
Sequences:
>Translated_114_residues MLRLEALILFTVLCGFFGIIFKKNLVMKVMSMDIMSTGVIAYYVLVASRDGVFTPIISERENVVAYSDPVPQAVILTAIV IGFSIQALMLVGVIKLSKDNPTLEANVIEKNNLP >Mature_114_residues MLRLEALILFTVLCGFFGIIFKKNLVMKVMSMDIMSTGVIAYYVLVASRDGVFTPIISERENVVAYSDPVPQAVILTAIV IGFSIQALMLVGVIKLSKDNPTLEANVIEKNNLP
Specific function: Unknown
COG id: COG1006
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12506; Mature: 12506
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLEALILFTVLCGFFGIIFKKNLVMKVMSMDIMSTGVIAYYVLVASRDGVFTPIISER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ENVVAYSDPVPQAVILTAIVIGFSIQALMLVGVIKLSKDNPTLEANVIEKNNLP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MLRLEALILFTVLCGFFGIIFKKNLVMKVMSMDIMSTGVIAYYVLVASRDGVFTPIISER CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC ENVVAYSDPVPQAVILTAIVIGFSIQALMLVGVIKLSKDNPTLEANVIEKNNLP CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA