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The map label for this gene is exeD [H]

Identifier: 113475300

GI number: 113475300

Start: 2461565

End: 2463970

Strand: Direct

Name: exeD [H]

Synonym: Tery_1609

Alternate gene names: 113475300

Gene position: 2461565-2463970 (Clockwise)

Preceding gene: 113475298

Following gene: 113475301

Centisome position: 31.76

GC content: 41.06

Gene sequence:

>2406_bases
GTGAAACAGCAAATTCAATTTAGTGGTGGACTTTTGACTGGAGTTGCGGCTATAATTATGGCCCAGACCCCAGCTTTTGC
AGTAACCAAAATAACCCAAGTTAAGTTAAATTCAGTAGATGGAGGAATTAATATCCTCTTATCTACTAGTAATGGCGATC
GCCCGGAAGTATTCTCAGTCAACAGAGATAACTCTTTTGTGGCAGACATAATTAATACTCAACTAACCCTACCCCAGGGC
AATAAATTTCGGAAAGATAATCCAGCTCCTGGTATAGAATATGTAGAAGTAATACAGGTGGATGCTAATAGCGTGCGGGT
AGTTATCCGAGGTACAGACAGTCCTCCTAGAGGTAGAATTATCCAAGGAGCAGGCCAAGGAATTATTCTTAGTGTGGCTG
CTAGCTCAGGAGAAATAGCTCAAAGACCTCAACCTAATAGTTTTCCCCCTCCCGATCAAGTAGCACCTCCTCCCTTAGAA
CCCCCAAATTTACCTGTACAACCTGAAAGAAATTTAGCACCGCCAAGAGAAACAGTTAGAACCCAAGAAAAAGTATTATT
ACCAGATTCAGGACTAACTGGAGATGGTTTTCCTAATCTACCAGGACAACCATCCCCCAGTCAAGTACCACCTTTTTTGC
CACGAGCAGTAGCACCACCAGTAGGAGATATAGCAATATCTAATATCAACCCTTCGGTAGAAGTTATAGATTTAAGTACC
CAAGAAAAAATACCTCGTTTAGTATTGCGAGATGCTCCAGTTAGAGATGTTTTGGCTTTACTAGCTAGGGCAGCAGGATT
AAACATTGCTTATAGTTCAGGTAAAGAAAAACAAGCAGGAGCAGAAGAGGAACAGACTATTTCTCTAGATATTGAGAATG
AGCCAGTTCAAGATGTTTTTAATTATGTTTTACGTTTAAGCGGGTTAGAAGCAAACCGAGTAGGTAATACAATATTTGTG
GGGCAAGAGTTACCAACACAAGCTAGAAATGTTGTGGTTCGTTCCTTCCGTCTAAACCAAGTTACTGCAAAAGCTGCAGC
AGGTTTTTTAGTCAGTCTAGGAGCAGAAAGTGCCTCTGTAACAAGCAAAACTGTAACTGAAACTGACGAAGTTGAGATTG
ATGATAAGAAACTTAAAAAGACTAAAATCACTGAAGATACAGTTGTTGAGCCACTACGCTACGAGCCCAAAGATGCCCCC
CCAATATTGAAAGGTTTACAAGTAGCGACTGATGATCGACTCAACAGTATTACCTTAGTTGGTTCGCCGCAAAAGGTAGA
AATAGCAGCAGCCCAATTAATTCAATTAGATTTAAGACAACGGCAAGTAGCTGTAAATGTCAAAGTTATAGATATTAATT
TAGTAGCGGAAGAAAATTTTAATAGTAGTTTTTCTTTTGGAGTGAATGACACTTTCTTTATTAACGATAATGGGGCAGCA
TCTCTAAATTTTGGCAGTCTCCAACCGGCTACTCGAGCACAGCAGACTACCAGTTTTCCTCTGGCTCGTCCTGTTACTGG
TAACCCACTTGTTGGAGACCCTTTCTATGATAGCCAACGTAGCTTTGAGGTCCCATCAACGGGTTTCCCTAATGTTAATC
AGGGTAGAGGTACTTTTCTCAGACCAATAGCTCCTACAACAGGGGAACCTACAAGAGTTGGTATTAGAGATTATACACCA
TCAGACGTAGGTGTTAATCCTACTAATGGACTATTAGACGTAACACCAGGAAATGCAGACTTTGGTTTGTTCCCCCAAAT
TTTGTATCCTAAAAGATTCCTCTCCCAGTTGCGGGCTACTATTGTAAGTGGTAATGCTAAAATTCTTACCGATCCAACTT
TAGTGGTTCAAGAAGGGGAAGTAGCTAGTCTCAAACTTGTAAATAATATCGTCAGAAGTATTGACAGTAATTTTACAGAT
GATGGGGGTACGAGTCGAGAAACTAGAACTGTTCAGTTTGAAGATGTAGGTTTGAACCTCGTTATACAGGTGGAGAGAAT
AGACGATAATGGCTTCGTAACTGTAACGGTAAATCCAGAAGTAAGCTTTATTTCGGACAGGGTACGAACAGATGCTAATA
ATTCAAGTGAATTTGGTACAGAAATTGCCAGCCGTAAGGTACAATCTGGTAGAATTCGTCTACGGGATGGACAAACTCTA
ATTATTTCTGGCATTATTCAAGAGCAAGAAAGAACAGCAGTAACTAAGGTACCTCTTTTGGGAGATTTACCAATTATTGG
TGCTCTCTTCCGCAGTAGTCAAAATCAAAATGAACGAGCAGAGACAATAGTGCTACTCACACCTCAAATACTCGATGATG
GCGATCGCTCCTCTTGGGGCTACCGATATAACCCAAGCCCAGATGCTTTGCAAATGATGGAAAGGGGGCAGCCCAGACCA
CGCTAA

Upstream 100 bases:

>100_bases
ACTTAAAGTATGGTAGCCTGAAAGCTGTATAAAAATCCCTATACTCTAGCCCAAGACTAACAGATGAATTAATAAAAAAG
CTCAGTGTGGAGTCAAGAAA

Downstream 100 bases:

>100_bases
AGTTAAATGTAAGGGATGGTCTATGTTGCTCAATTTGAACCATCTCATTTGACTTTATTTCCCAAAAAAACTAAGACGTC
TTAGTTTTTAGTCACTATCT

Product: type II and III secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MKQQIQFSGGLLTGVAAIIMAQTPAFAVTKITQVKLNSVDGGINILLSTSNGDRPEVFSVNRDNSFVADIINTQLTLPQG
NKFRKDNPAPGIEYVEVIQVDANSVRVVIRGTDSPPRGRIIQGAGQGIILSVAASSGEIAQRPQPNSFPPPDQVAPPPLE
PPNLPVQPERNLAPPRETVRTQEKVLLPDSGLTGDGFPNLPGQPSPSQVPPFLPRAVAPPVGDIAISNINPSVEVIDLST
QEKIPRLVLRDAPVRDVLALLARAAGLNIAYSSGKEKQAGAEEEQTISLDIENEPVQDVFNYVLRLSGLEANRVGNTIFV
GQELPTQARNVVVRSFRLNQVTAKAAAGFLVSLGAESASVTSKTVTETDEVEIDDKKLKKTKITEDTVVEPLRYEPKDAP
PILKGLQVATDDRLNSITLVGSPQKVEIAAAQLIQLDLRQRQVAVNVKVIDINLVAEENFNSSFSFGVNDTFFINDNGAA
SLNFGSLQPATRAQQTTSFPLARPVTGNPLVGDPFYDSQRSFEVPSTGFPNVNQGRGTFLRPIAPTTGEPTRVGIRDYTP
SDVGVNPTNGLLDVTPGNADFGLFPQILYPKRFLSQLRATIVSGNAKILTDPTLVVQEGEVASLKLVNNIVRSIDSNFTD
DGGTSRETRTVQFEDVGLNLVIQVERIDDNGFVTVTVNPEVSFISDRVRTDANNSSEFGTEIASRKVQSGRIRLRDGQTL
IISGIIQEQERTAVTKVPLLGDLPIIGALFRSSQNQNERAETIVLLTPQILDDGDRSSWGYRYNPSPDALQMMERGQPRP
R

Sequences:

>Translated_801_residues
MKQQIQFSGGLLTGVAAIIMAQTPAFAVTKITQVKLNSVDGGINILLSTSNGDRPEVFSVNRDNSFVADIINTQLTLPQG
NKFRKDNPAPGIEYVEVIQVDANSVRVVIRGTDSPPRGRIIQGAGQGIILSVAASSGEIAQRPQPNSFPPPDQVAPPPLE
PPNLPVQPERNLAPPRETVRTQEKVLLPDSGLTGDGFPNLPGQPSPSQVPPFLPRAVAPPVGDIAISNINPSVEVIDLST
QEKIPRLVLRDAPVRDVLALLARAAGLNIAYSSGKEKQAGAEEEQTISLDIENEPVQDVFNYVLRLSGLEANRVGNTIFV
GQELPTQARNVVVRSFRLNQVTAKAAAGFLVSLGAESASVTSKTVTETDEVEIDDKKLKKTKITEDTVVEPLRYEPKDAP
PILKGLQVATDDRLNSITLVGSPQKVEIAAAQLIQLDLRQRQVAVNVKVIDINLVAEENFNSSFSFGVNDTFFINDNGAA
SLNFGSLQPATRAQQTTSFPLARPVTGNPLVGDPFYDSQRSFEVPSTGFPNVNQGRGTFLRPIAPTTGEPTRVGIRDYTP
SDVGVNPTNGLLDVTPGNADFGLFPQILYPKRFLSQLRATIVSGNAKILTDPTLVVQEGEVASLKLVNNIVRSIDSNFTD
DGGTSRETRTVQFEDVGLNLVIQVERIDDNGFVTVTVNPEVSFISDRVRTDANNSSEFGTEIASRKVQSGRIRLRDGQTL
IISGIIQEQERTAVTKVPLLGDLPIIGALFRSSQNQNERAETIVLLTPQILDDGDRSSWGYRYNPSPDALQMMERGQPRP
R
>Mature_801_residues
MKQQIQFSGGLLTGVAAIIMAQTPAFAVTKITQVKLNSVDGGINILLSTSNGDRPEVFSVNRDNSFVADIINTQLTLPQG
NKFRKDNPAPGIEYVEVIQVDANSVRVVIRGTDSPPRGRIIQGAGQGIILSVAASSGEIAQRPQPNSFPPPDQVAPPPLE
PPNLPVQPERNLAPPRETVRTQEKVLLPDSGLTGDGFPNLPGQPSPSQVPPFLPRAVAPPVGDIAISNINPSVEVIDLST
QEKIPRLVLRDAPVRDVLALLARAAGLNIAYSSGKEKQAGAEEEQTISLDIENEPVQDVFNYVLRLSGLEANRVGNTIFV
GQELPTQARNVVVRSFRLNQVTAKAAAGFLVSLGAESASVTSKTVTETDEVEIDDKKLKKTKITEDTVVEPLRYEPKDAP
PILKGLQVATDDRLNSITLVGSPQKVEIAAAQLIQLDLRQRQVAVNVKVIDINLVAEENFNSSFSFGVNDTFFINDNGAA
SLNFGSLQPATRAQQTTSFPLARPVTGNPLVGDPFYDSQRSFEVPSTGFPNVNQGRGTFLRPIAPTTGEPTRVGIRDYTP
SDVGVNPTNGLLDVTPGNADFGLFPQILYPKRFLSQLRATIVSGNAKILTDPTLVVQEGEVASLKLVNNIVRSIDSNFTD
DGGTSRETRTVQFEDVGLNLVIQVERIDDNGFVTVTVNPEVSFISDRVRTDANNSSEFGTEIASRKVQSGRIRLRDGQTL
IISGIIQEQERTAVTKVPLLGDLPIIGALFRSSQNQNERAETIVLLTPQILDDGDRSSWGYRYNPSPDALQMMERGQPRP
R

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 86644; Mature: 86644

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQIQFSGGLLTGVAAIIMAQTPAFAVTKITQVKLNSVDGGINILLSTSNGDRPEVFSV
CCCEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEE
NRDNSFVADIINTQLTLPQGNKFRKDNPAPGIEYVEVIQVDANSVRVVIRGTDSPPRGRI
CCCCCHHEEECCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCE
IQGAGQGIILSVAASSGEIAQRPQPNSFPPPDQVAPPPLEPPNLPVQPERNLAPPRETVR
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
TQEKVLLPDSGLTGDGFPNLPGQPSPSQVPPFLPRAVAPPVGDIAISNINPSVEVIDLST
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCEEEEECCC
QEKIPRLVLRDAPVRDVLALLARAAGLNIAYSSGKEKQAGAEEEQTISLDIENEPVQDVF
HHHCCHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHH
NYVLRLSGLEANRVGNTIFVGQELPTQARNVVVRSFRLNQVTAKAAAGFLVSLGAESASV
HHHHHHCCCCHHCCCCEEEECCCCCHHHHHHEEEEEECHHHHHHHHCCEEEEECCCCCCC
TSKTVTETDEVEIDDKKLKKTKITEDTVVEPLRYEPKDAPPILKGLQVATDDRLNSITLV
CCCCCCCCCCEEECHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCEEECCCCCCEEEEE
GSPQKVEIAAAQLIQLDLRQRQVAVNVKVIDINLVAEENFNSSFSFGVNDTFFINDNGAA
CCCCEEHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEECCCCCCEECCCCCEEEECCCCCE
SLNFGSLQPATRAQQTTSFPLARPVTGNPLVGDPFYDSQRSFEVPSTGFPNVNQGRGTFL
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
RPIAPTTGEPTRVGIRDYTPSDVGVNPTNGLLDVTPGNADFGLFPQILYPKRFLSQLRAT
ECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCHHHHHHHHHHH
IVSGNAKILTDPTLVVQEGEVASLKLVNNIVRSIDSNFTDDGGTSRETRTVQFEDVGLNL
EECCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEE
VIQVERIDDNGFVTVTVNPEVSFISDRVRTDANNSSEFGTEIASRKVQSGRIRLRDGQTL
EEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCEE
IISGIIQEQERTAVTKVPLLGDLPIIGALFRSSQNQNERAETIVLLTPQILDDGDRSSWG
EEEEHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCC
YRYNPSPDALQMMERGQPRPR
EEECCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQQIQFSGGLLTGVAAIIMAQTPAFAVTKITQVKLNSVDGGINILLSTSNGDRPEVFSV
CCCEEEECCCHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEE
NRDNSFVADIINTQLTLPQGNKFRKDNPAPGIEYVEVIQVDANSVRVVIRGTDSPPRGRI
CCCCCHHEEECCCEEECCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCE
IQGAGQGIILSVAASSGEIAQRPQPNSFPPPDQVAPPPLEPPNLPVQPERNLAPPRETVR
EECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHC
TQEKVLLPDSGLTGDGFPNLPGQPSPSQVPPFLPRAVAPPVGDIAISNINPSVEVIDLST
CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEEECCCCCEEEEECCC
QEKIPRLVLRDAPVRDVLALLARAAGLNIAYSSGKEKQAGAEEEQTISLDIENEPVQDVF
HHHCCHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEECCCCHHHHH
NYVLRLSGLEANRVGNTIFVGQELPTQARNVVVRSFRLNQVTAKAAAGFLVSLGAESASV
HHHHHHCCCCHHCCCCEEEECCCCCHHHHHHEEEEEECHHHHHHHHCCEEEEECCCCCCC
TSKTVTETDEVEIDDKKLKKTKITEDTVVEPLRYEPKDAPPILKGLQVATDDRLNSITLV
CCCCCCCCCCEEECHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCEEECCCCCCEEEEE
GSPQKVEIAAAQLIQLDLRQRQVAVNVKVIDINLVAEENFNSSFSFGVNDTFFINDNGAA
CCCCEEHHHHHHHHHHHHHCEEEEEEEEEEEEEEEEECCCCCCEECCCCCEEEECCCCCE
SLNFGSLQPATRAQQTTSFPLARPVTGNPLVGDPFYDSQRSFEVPSTGFPNVNQGRGTFL
EEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
RPIAPTTGEPTRVGIRDYTPSDVGVNPTNGLLDVTPGNADFGLFPQILYPKRFLSQLRAT
ECCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHCHHHHHHHHHHH
IVSGNAKILTDPTLVVQEGEVASLKLVNNIVRSIDSNFTDDGGTSRETRTVQFEDVGLNL
EECCCCEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCEEE
VIQVERIDDNGFVTVTVNPEVSFISDRVRTDANNSSEFGTEIASRKVQSGRIRLRDGQTL
EEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCEE
IISGIIQEQERTAVTKVPLLGDLPIIGALFRSSQNQNERAETIVLLTPQILDDGDRSSWG
EEEEHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEHHHHCCCCCCCCC
YRYNPSPDALQMMERGQPRPR
EEECCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1640836 [H]