Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475298

Identifier: 113475298

GI number: 113475298

Start: 2454785

End: 2455579

Strand: Direct

Name: 113475298

Synonym: Tery_1607

Alternate gene names: NA

Gene position: 2454785-2455579 (Clockwise)

Preceding gene: 113475297

Following gene: 113475300

Centisome position: 31.67

GC content: 33.21

Gene sequence:

>795_bases
ATGGTAGCAACAAATGAGATAGATATAGACTTAGAAGAACTAGAAGAAGAAGGAGAAGAATTTCAAGTTCCTTTGCTAAA
TATGTCTGTCAAAGACCCGAGATTTATTGGAGGAACTATTGGTATTTTAGGCTTTGGAATAGCAGCTTTCTTAGGATATA
GTCAGCTTAAACCAACTATAGAAAAAAATACTGAATTAAGGGCAGAGATAGAAGCAGCAGAAATCAAAATTAAACAGCAG
AAAAAACAAATAGAAGAACGACCAAAGGTAGAGGAGGAAAACAAAAAAGCTGAAAGAAAAAGGGAAGATGTAACCAGCTT
ATTTGCTAGTGAAAAAACTATGAAAACTCTACTATATGATGTTAATCAACTTATCGATCAAATTAATGGCGGAATTACAG
AGGAAGAAAAACAAGCAAAAATGACAAAGTTTCAACCAGTTGAGCCAAAAAATGGTAATTATATAGTTAATGATAACTCA
TTAGGACCACTGGTAAATGGCAAGTTAAAGCGACGAGAATTCAAAGTAGAATTTGAAGGTAGTTATCCCCAAACAAGAGC
ATTTATGACTGCTATAGAGAGGATGGAAACATTATTAGTAGTGAAAAACTTAATAACTAAACTCAAACAAGGAAATGAGG
TTATAGAAGTTGAATGGAGGCAAAATAAATTTGTGCCAGTTAGCAAGCCAGAAAGTCGACTAATATCATCCTTTGATATG
CATGCTCTATTGGCTTTAAGTGAAAAAGAGTCATTGGGTGTAAAAGGTTCTACAAAACAAGAAGAAAATAAGTAA

Upstream 100 bases:

>100_bases
CTTTAGGTGCATCAGAATTACTGCCTGAGTTAAAAAGTCAAGGAGCAATTGGATTAGTAGATAGAATAGAAATACTAAAA
GAAAAAGGAATACTTTAAAA

Downstream 100 bases:

>100_bases
CATCATCTGCCAAATAAATGTTATTTTTTCAAAGAAATTAGGTTTAAAATTTCATCTTTATTTGACCTTATTTTTTCCCT
AAAGCTAGGGTGAAAGTAGA

Product: type IV pilus assembly protein PilO

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Type IV Pilus Assembly Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVATNEIDIDLEELEEEGEEFQVPLLNMSVKDPRFIGGTIGILGFGIAAFLGYSQLKPTIEKNTELRAEIEAAEIKIKQQ
KKQIEERPKVEEENKKAERKREDVTSLFASEKTMKTLLYDVNQLIDQINGGITEEEKQAKMTKFQPVEPKNGNYIVNDNS
LGPLVNGKLKRREFKVEFEGSYPQTRAFMTAIERMETLLVVKNLITKLKQGNEVIEVEWRQNKFVPVSKPESRLISSFDM
HALLALSEKESLGVKGSTKQEENK

Sequences:

>Translated_264_residues
MVATNEIDIDLEELEEEGEEFQVPLLNMSVKDPRFIGGTIGILGFGIAAFLGYSQLKPTIEKNTELRAEIEAAEIKIKQQ
KKQIEERPKVEEENKKAERKREDVTSLFASEKTMKTLLYDVNQLIDQINGGITEEEKQAKMTKFQPVEPKNGNYIVNDNS
LGPLVNGKLKRREFKVEFEGSYPQTRAFMTAIERMETLLVVKNLITKLKQGNEVIEVEWRQNKFVPVSKPESRLISSFDM
HALLALSEKESLGVKGSTKQEENK
>Mature_264_residues
MVATNEIDIDLEELEEEGEEFQVPLLNMSVKDPRFIGGTIGILGFGIAAFLGYSQLKPTIEKNTELRAEIEAAEIKIKQQ
KKQIEERPKVEEENKKAERKREDVTSLFASEKTMKTLLYDVNQLIDQINGGITEEEKQAKMTKFQPVEPKNGNYIVNDNS
LGPLVNGKLKRREFKVEFEGSYPQTRAFMTAIERMETLLVVKNLITKLKQGNEVIEVEWRQNKFVPVSKPESRLISSFDM
HALLALSEKESLGVKGSTKQEENK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30078; Mature: 30078

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATNEIDIDLEELEEEGEEFQVPLLNMSVKDPRFIGGTIGILGFGIAAFLGYSQLKPTI
CCCCCCCCCCHHHHHCCCCEEECEEECCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCH
EKNTELRAEIEAAEIKIKQQKKQIEERPKVEEENKKAERKREDVTSLFASEKTMKTLLYD
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQLIDQINGGITEEEKQAKMTKFQPVEPKNGNYIVNDNSLGPLVNGKLKRREFKVEFEG
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEECEEEEEEECC
SYPQTRAFMTAIERMETLLVVKNLITKLKQGNEVIEVEWRQNKFVPVSKPESRLISSFDM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
HALLALSEKESLGVKGSTKQEENK
HHHHEECCHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVATNEIDIDLEELEEEGEEFQVPLLNMSVKDPRFIGGTIGILGFGIAAFLGYSQLKPTI
CCCCCCCCCCHHHHHCCCCEEECEEECCCCCCCCHHCHHHHHHHHHHHHHHHHHHCCCCH
EKNTELRAEIEAAEIKIKQQKKQIEERPKVEEENKKAERKREDVTSLFASEKTMKTLLYD
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNQLIDQINGGITEEEKQAKMTKFQPVEPKNGNYIVNDNSLGPLVNGKLKRREFKVEFEG
HHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEECEEEEEEECC
SYPQTRAFMTAIERMETLLVVKNLITKLKQGNEVIEVEWRQNKFVPVSKPESRLISSFDM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHH
HALLALSEKESLGVKGSTKQEENK
HHHHEECCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA