Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475279

Identifier: 113475279

GI number: 113475279

Start: 2427881

End: 2428261

Strand: Reverse

Name: 113475279

Synonym: Tery_1588

Alternate gene names: NA

Gene position: 2428261-2427881 (Counterclockwise)

Preceding gene: 113475282

Following gene: 113475278

Centisome position: 31.33

GC content: 33.33

Gene sequence:

>381_bases
ATGTCAGAAAATTCCGGGGATAAAGTTTCTATTCAAGAAGTTTATGGTGTAGGTATTAACAAGGGAAATATTAATACCTC
AAAATTTGCTAAGACAATGACAATTTATGAATCTCAACAACAAAACTTGACAGAAGCAGCAAGAGATATTCAAGAATTAC
TAGAGCAACTAGAAAAAACTTATCCGTCAGAAACAACAATGGACAGAATGAAAATTGCTACAGAGGTAATTACACATATT
GATAATCATCCGACTAAGGCACAAAAAATATTTAGCGCTATAAAAGCTGGTGGAGTTGCTGCTGTTGAACAATTACTTAA
TCATCCTGCTAGTAGCTTTGTTATTGCAGCTTTGGAAGATTGGCAAAAATCCAAATCATAA

Upstream 100 bases:

>100_bases
GTTGAGTTTGCTTTGGTGGCGATCGCTATTCCTTTTTTAAGTTAATATGTGGGAGAGTTAAAAAGCCCATTAAATATCAA
ATTCTAAATTAGGTACAAAT

Downstream 100 bases:

>100_bases
ACAAGGTTAATATGTCAGATAATTTTGAGGATAAAGTTGATATTAAGGAGACTCATGGTGTTGGTGTTAATTCAGGCAAT
ATTGTAAATTCAACTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MSENSGDKVSIQEVYGVGINKGNINTSKFAKTMTIYESQQQNLTEAARDIQELLEQLEKTYPSETTMDRMKIATEVITHI
DNHPTKAQKIFSAIKAGGVAAVEQLLNHPASSFVIAALEDWQKSKS

Sequences:

>Translated_126_residues
MSENSGDKVSIQEVYGVGINKGNINTSKFAKTMTIYESQQQNLTEAARDIQELLEQLEKTYPSETTMDRMKIATEVITHI
DNHPTKAQKIFSAIKAGGVAAVEQLLNHPASSFVIAALEDWQKSKS
>Mature_125_residues
SENSGDKVSIQEVYGVGINKGNINTSKFAKTMTIYESQQQNLTEAARDIQELLEQLEKTYPSETTMDRMKIATEVITHID
NHPTKAQKIFSAIKAGGVAAVEQLLNHPASSFVIAALEDWQKSKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13928; Mature: 13797

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENSGDKVSIQEVYGVGINKGNINTSKFAKTMTIYESQQQNLTEAARDIQELLEQLEKT
CCCCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPSETTMDRMKIATEVITHIDNHPTKAQKIFSAIKAGGVAAVEQLLNHPASSFVIAALED
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
WQKSKS
HHCCCC
>Mature Secondary Structure 
SENSGDKVSIQEVYGVGINKGNINTSKFAKTMTIYESQQQNLTEAARDIQELLEQLEKT
CCCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YPSETTMDRMKIATEVITHIDNHPTKAQKIFSAIKAGGVAAVEQLLNHPASSFVIAALED
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHH
WQKSKS
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA