Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475282

Identifier: 113475282

GI number: 113475282

Start: 2432525

End: 2433232

Strand: Reverse

Name: 113475282

Synonym: Tery_1591

Alternate gene names: NA

Gene position: 2433232-2432525 (Counterclockwise)

Preceding gene: 113475283

Following gene: 113475279

Centisome position: 31.4

GC content: 31.07

Gene sequence:

>708_bases
ATGAAATTTTATAAGCCTTTTATTCAAAAAAAGTTGTCTGATAAAAATCATGATAAGACTGAAGACATTAGTTTACTTAT
TAATCAAAATAAATCTTTGACAAAGCAAATACCTATTTGGCGGTTTGTTTTGCCTTTAACTTTGCAATTAGCATTAATTT
TATCAGTTTCTGCCCAAGCTATTTATACTCACATTACAGGTAGAACAGTTATTTTACAAACTGCACCTGTAGACCCCTAT
GATTTTTTGCGCGGTTATTATCAAGTTTTAAGTTATGATATTTCCCGCAAAGATAACTTGAGTAAACTTCCGGGTTGGCA
TCAATTTGATTTTGAAACTTCAGGCAGATTTGATGGGGAAAATAAAACTAATATTTATGTAATTTTAGCTGAACCTGAAA
AAATAAAAAATTCACAAATACCTAAAGCTTGGCAACCTATAGGTATAAGTTCAAAAATGCCAGAAAATTTGCCAGATAAC
CAAATAGCTATTCAAGGAAAATTTGATGGTGGGAGAGTTAAATATGGCTTAGAAACTTATTTTATGCCAGAGGATAGACG
AGAAAAAATTAATCAAGATATTCAGGAAGTACAAGATAGTGTTAATTCAGAAGAAGACATACCTTTTGTTATAGAAGCAA
AAGTCAATTCTCAAGGTAAGGCTGTACCTGTGAGTTTGTGGGTTAGAGAGCGTAATTATATGTTTTAA

Upstream 100 bases:

>100_bases
TGAATATTTACCCTTAAAACTATAGATATAAAATAATTTAACTAAATTACTTTAGTACCAAAATTTTTGCCATAAAAATA
TTAATAAATGGAGAGATAAA

Downstream 100 bases:

>100_bases
TATTCTTATTTTTCATGAAGTTTTAGCCCTAATATTATCACAAGTTAACTTGAAAATCGAAACTTATCTTGCTTAAGGAC
TCATTGGTTTTAAGGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKFYKPFIQKKLSDKNHDKTEDISLLINQNKSLTKQIPIWRFVLPLTLQLALILSVSAQAIYTHITGRTVILQTAPVDPY
DFLRGYYQVLSYDISRKDNLSKLPGWHQFDFETSGRFDGENKTNIYVILAEPEKIKNSQIPKAWQPIGISSKMPENLPDN
QIAIQGKFDGGRVKYGLETYFMPEDRREKINQDIQEVQDSVNSEEDIPFVIEAKVNSQGKAVPVSLWVRERNYMF

Sequences:

>Translated_235_residues
MKFYKPFIQKKLSDKNHDKTEDISLLINQNKSLTKQIPIWRFVLPLTLQLALILSVSAQAIYTHITGRTVILQTAPVDPY
DFLRGYYQVLSYDISRKDNLSKLPGWHQFDFETSGRFDGENKTNIYVILAEPEKIKNSQIPKAWQPIGISSKMPENLPDN
QIAIQGKFDGGRVKYGLETYFMPEDRREKINQDIQEVQDSVNSEEDIPFVIEAKVNSQGKAVPVSLWVRERNYMF
>Mature_235_residues
MKFYKPFIQKKLSDKNHDKTEDISLLINQNKSLTKQIPIWRFVLPLTLQLALILSVSAQAIYTHITGRTVILQTAPVDPY
DFLRGYYQVLSYDISRKDNLSKLPGWHQFDFETSGRFDGENKTNIYVILAEPEKIKNSQIPKAWQPIGISSKMPENLPDN
QIAIQGKFDGGRVKYGLETYFMPEDRREKINQDIQEVQDSVNSEEDIPFVIEAKVNSQGKAVPVSLWVRERNYMF

Specific function: Unknown

COG id: COG4929

COG function: function code S; Uncharacterized membrane-anchored protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27201; Mature: 27201

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFYKPFIQKKLSDKNHDKTEDISLLINQNKSLTKQIPIWRFVLPLTLQLALILSVSAQA
CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHE
IYTHITGRTVILQTAPVDPYDFLRGYYQVLSYDISRKDNLSKLPGWHQFDFETSGRFDGE
EEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEECCCCCCCCCCC
NKTNIYVILAEPEKIKNSQIPKAWQPIGISSKMPENLPDNQIAIQGKFDGGRVKYGLETY
CCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECEEEE
FMPEDRREKINQDIQEVQDSVNSEEDIPFVIEAKVNSQGKAVPVSLWVRERNYMF
ECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCC
>Mature Secondary Structure
MKFYKPFIQKKLSDKNHDKTEDISLLINQNKSLTKQIPIWRFVLPLTLQLALILSVSAQA
CCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHE
IYTHITGRTVILQTAPVDPYDFLRGYYQVLSYDISRKDNLSKLPGWHQFDFETSGRFDGE
EEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEECCCCCCCCCCC
NKTNIYVILAEPEKIKNSQIPKAWQPIGISSKMPENLPDNQIAIQGKFDGGRVKYGLETY
CCCEEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECEEEE
FMPEDRREKINQDIQEVQDSVNSEEDIPFVIEAKVNSQGKAVPVSLWVRERNYMF
ECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA