Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475277

Identifier: 113475277

GI number: 113475277

Start: 2424052

End: 2424396

Strand: Direct

Name: 113475277

Synonym: Tery_1586

Alternate gene names: NA

Gene position: 2424052-2424396 (Clockwise)

Preceding gene: 113475275

Following gene: 113475280

Centisome position: 31.28

GC content: 31.88

Gene sequence:

>345_bases
ATGGCTATGGATATAAAGAAGAAAAGACTATTTAAATTAGATGGATTTATTAAGCTATTAAAATTTATTAGTTTTGGGGT
TGGAGTTTTTGCGATCGCAGGAATAGCAATCTATCCTTTAATAGGCAATAAACCTGTAGATGAAGTCAAGGATAAAACAG
AAGAAACTACTAGTGTTTTACCTCCTGCTAACTATACAATTATTATGGGTAAACAGGAGAATGAAGTAGTTATAAAGTTC
CACAAACAAGCTTCAGAATTACACCTAAAGAATATATCTACTAAAGAGTCTAATTGCTTGCTCAATGGCGGCAGATTAAA
TTGTGTTTTAGCTACAGCTTACTAA

Upstream 100 bases:

>100_bases
GTTTTTGGTTGTGCTAAGTCTGGTAAGTCTAAATCGTGGAAGGTGGCTTCTTATTGGTATGAGGAATTAAAGCACAAATA
CGATGATTTAGGAAGGTAAA

Downstream 100 bases:

>100_bases
CCTAAATCAGAAGCAACTGAAAAGCAAGTTAAAACTACTCCTAAAGATGAATTTAAACACCAATTCTATAAGATTCCAGA
TATAGAAATTAGTAGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MAMDIKKKRLFKLDGFIKLLKFISFGVGVFAIAGIAIYPLIGNKPVDEVKDKTEETTSVLPPANYTIIMGKQENEVVIKF
HKQASELHLKNISTKESNCLLNGGRLNCVLATAY

Sequences:

>Translated_114_residues
MAMDIKKKRLFKLDGFIKLLKFISFGVGVFAIAGIAIYPLIGNKPVDEVKDKTEETTSVLPPANYTIIMGKQENEVVIKF
HKQASELHLKNISTKESNCLLNGGRLNCVLATAY
>Mature_113_residues
AMDIKKKRLFKLDGFIKLLKFISFGVGVFAIAGIAIYPLIGNKPVDEVKDKTEETTSVLPPANYTIIMGKQENEVVIKFH
KQASELHLKNISTKESNCLLNGGRLNCVLATAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12642; Mature: 12511

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMDIKKKRLFKLDGFIKLLKFISFGVGVFAIAGIAIYPLIGNKPVDEVKDKTEETTSVL
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCC
PPANYTIIMGKQENEVVIKFHKQASELHLKNISTKESNCLLNGGRLNCVLATAY
CCCCEEEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCEEEECCEEEEEEEECC
>Mature Secondary Structure 
AMDIKKKRLFKLDGFIKLLKFISFGVGVFAIAGIAIYPLIGNKPVDEVKDKTEETTSVL
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCC
PPANYTIIMGKQENEVVIKFHKQASELHLKNISTKESNCLLNGGRLNCVLATAY
CCCCEEEEEECCCCCEEEEEECCCHHHHHCCCCCCCCCEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA