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The map label for this gene is fni [H]

Identifier: 113475280

GI number: 113475280

Start: 2429001

End: 2430038

Strand: Direct

Name: fni [H]

Synonym: Tery_1589

Alternate gene names: 113475280

Gene position: 2429001-2430038 (Clockwise)

Preceding gene: 113475277

Following gene: 113475281

Centisome position: 31.34

GC content: 40.75

Gene sequence:

>1038_bases
ATGAACTCAATATCACAAACTCAATCCCGCAAAGCAGATCATCTAAGAGTTTGCTTAGAATCAGATGTCCAATTTAACAA
CAAGACCAATGGATTAGACAAATACCGTTTTACTCACTGCTGTTTACCAGAACTAAACCGCAGTGAAATAGATACTAAAA
CTACATTTCTTGGGAAGCAACTGGGCGCGCCATTATTAATATCTTCGATGACAGGTGGCACTGAGCAAGCTAAAATGATT
AATTATCGGTTAGCCAAAGTTGCCCAACACTATAAAATAGCCATGGGAGTTGGTTCCGAACGAGTTGCGGTAGAAAATTC
CCAAGTGGCTGATACTTTTGCTGTGCGATCGCTTGCTCCTGATATTCTATTGTTTGCCAACCTAGGAGCTGTCCAACTCA
ACTATAATTATGGCATTGACCAGTGCCAACGAGCGATTGATATTTTAGAAGCAGATGCCCTCATTTTACATCTCAATCCT
CTTCAAGAGTGCATTCAGACTGAAGGTGATACTAATTTCCGAGGTATCCTTGACAAAATATCAAAATTGTGCTATTCGCT
GTCAGTGCCAGTAATTGCTAAAGAAGTAGGTAATGGGATTTCCGGTTCAATGGCCAAAAAGTTAATTGATGCTGGAGTAG
GAGCGATTGACGTTGCAGGAGCTGGAGGGACTTCTTGGGCAAAAATTGAAGGGGAGCGGGGGAAAGACCCACTTCAGCGT
CGGTTAGGAAATACTTTTGGGAATTGGGGTTTACCTACTGCAGAATGTATTAGCGCTATCCGCACCCTGAATTCAGACAT
TCCTCTAATTGCTTCTGGAGGGTTACGAAATGGGTTAGAAGTAGCAAAGGCGATCGCTCTTGGTGCAGATCTAAGTGGAT
TAGCTTGGCCATTTCTTCAAGCAGCAGTCAAATCAGAAGAATCTCTCAATTTATTAGTAGATATATTAATAGCAGAAATA
ACGACAGTTCTATTTTGTACAGGCAATGCCAATTTATTAGAACTGAAAAAATCTCAGGCTTTAGAAAAATTAACATAA

Upstream 100 bases:

>100_bases
CGTTCCAGCCATTTTTTGGCCTGAATTCCCCACAACTCTAGTATATTGAGATAAACAAGTTTTTGATAAACTTCTGTGTG
AATCTGTAATAATAAAACTG

Downstream 100 bases:

>100_bases
AAACAAAGTATTAGTCATGGCATCAATTCAACAATTAAAAGTGCTTTGTTGCCATAATTAATTTCAAACCATAGTATAAA
TTTAAATTGCGACTAGTAAA

Product: isopentenyl pyrophosphate isomerase

Products: NA

Alternate protein names: IPP isomerase; Isopentenyl pyrophosphate isomerase [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNSISQTQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQLGAPLLISSMTGGTEQAKMI
NYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAPDILLFANLGAVQLNYNYGIDQCQRAIDILEADALILHLNP
LQECIQTEGDTNFRGILDKISKLCYSLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQR
RLGNTFGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQAAVKSEESLNLLVDILIAEI
TTVLFCTGNANLLELKKSQALEKLT

Sequences:

>Translated_345_residues
MNSISQTQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQLGAPLLISSMTGGTEQAKMI
NYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAPDILLFANLGAVQLNYNYGIDQCQRAIDILEADALILHLNP
LQECIQTEGDTNFRGILDKISKLCYSLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQR
RLGNTFGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQAAVKSEESLNLLVDILIAEI
TTVLFCTGNANLLELKKSQALEKLT
>Mature_345_residues
MNSISQTQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQLGAPLLISSMTGGTEQAKMI
NYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAPDILLFANLGAVQLNYNYGIDQCQRAIDILEADALILHLNP
LQECIQTEGDTNFRGILDKISKLCYSLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQR
RLGNTFGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQAAVKSEESLNLLVDILIAEI
TTVLFCTGNANLLELKKSQALEKLT

Specific function: Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) [H]

COG id: COG1304

COG function: function code C; L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IPP isomerase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000262
- InterPro:   IPR011179 [H]

Pfam domain/function: PF01070 FMN_dh [H]

EC number: =5.3.3.2 [H]

Molecular weight: Translated: 37090; Mature: 37090

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSISQTQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQ
CCCCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCHHHHHHHHHH
LGAPLLISSMTGGTEQAKMINYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAP
HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHHHHHHHHHHHCC
DILLFANLGAVQLNYNYGIDQCQRAIDILEADALILHLNPLQECIQTEGDTNFRGILDKI
HHEEEECCCEEEEECCCCHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCCCHHHHHHHHH
SKLCYSLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQR
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHH
RLGNTFGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQ
HHCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH
AAVKSEESLNLLVDILIAEITTVLFCTGNANLLELKKSQALEKLT
HHHCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSISQTQSRKADHLRVCLESDVQFNNKTNGLDKYRFTHCCLPELNRSEIDTKTTFLGKQ
CCCCCHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHCHHHHHHHHHH
LGAPLLISSMTGGTEQAKMINYRLAKVAQHYKIAMGVGSERVAVENSQVADTFAVRSLAP
HCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCHHHHHHHHHHHCC
DILLFANLGAVQLNYNYGIDQCQRAIDILEADALILHLNPLQECIQTEGDTNFRGILDKI
HHEEEECCCEEEEECCCCHHHHHHHHHHHHHCEEEEEEHHHHHHHHCCCCCHHHHHHHHH
SKLCYSLSVPVIAKEVGNGISGSMAKKLIDAGVGAIDVAGAGGTSWAKIEGERGKDPLQR
HHHHHHCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHH
RLGNTFGNWGLPTAECISAIRTLNSDIPLIASGGLRNGLEVAKAIALGADLSGLAWPFLQ
HHCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHH
AAVKSEESLNLLVDILIAEITTVLFCTGNANLLELKKSQALEKLT
HHHCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA