| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is coaD
Identifier: 113475264
GI number: 113475264
Start: 2405021
End: 2405527
Strand: Direct
Name: coaD
Synonym: Tery_1572
Alternate gene names: 113475264
Gene position: 2405021-2405527 (Clockwise)
Preceding gene: 113475260
Following gene: 113475265
Centisome position: 31.03
GC content: 36.09
Gene sequence:
>507_bases GTGATTGCAATTTATCCAGGCAGTTTCGACCCCATTACCTTAGGTCATATAGATATTATAGAAAGAGGCTGCAACCTGTT TGAAAAAGTAATTGTAGCTGTCCTGCGAAATCAAAGTAAGACCTCTTTATTTACTATTGAGCAGCGTTTGAATCAAATTT GTCATTCCACAAAACACCTGCTTAATGTAGAGGTAGCCAGTTTTGATGGTTTAGCGGTAAACTATGCAAAAATGCAACAG GCTAAAGTCCTAATTCGAGGTCTACGAGTTCTTTCAGATTTTGAAAAAGAATTACAGATGGCCCATACTAATAAAACCTT GTCACCTGAAATAGAGACAGTTTTTTTAGCTACCTCTAATGAATATAGTTTTTTAAGTAGTAGTGTAGTTAAAGAAATTG CTGTTTTTGGTGGCTCAGTAGATCATCTCGTTCCCCAGCACATTGCTATTGATATTTATAAATGTTACGACAAAACTCAG CCAAAGCCAATATTGAACCAGAGGTAA
Upstream 100 bases:
>100_bases GAATCATATTAATTTTTATATTAAACACCCAGCTTTTAAAAGTTGAGTAAATTTGGGAAAAACCTTGCTAAAATACTTTA GTAACTCTTAAATACGACCC
Downstream 100 bases:
>100_bases ATGGGCAAAATGTCGAGAGTCAACCTGCCAGTGGTTCCCCTGGAGTAGATATCCAGCGAGAACTGAATAGGCTGGAAGAG ATTATTCTTGATAGTCCTAG
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MIAIYPGSFDPITLGHIDIIERGCNLFEKVIVAVLRNQSKTSLFTIEQRLNQICHSTKHLLNVEVASFDGLAVNYAKMQQ AKVLIRGLRVLSDFEKELQMAHTNKTLSPEIETVFLATSNEYSFLSSSVVKEIAVFGGSVDHLVPQHIAIDIYKCYDKTQ PKPILNQR
Sequences:
>Translated_168_residues MIAIYPGSFDPITLGHIDIIERGCNLFEKVIVAVLRNQSKTSLFTIEQRLNQICHSTKHLLNVEVASFDGLAVNYAKMQQ AKVLIRGLRVLSDFEKELQMAHTNKTLSPEIETVFLATSNEYSFLSSSVVKEIAVFGGSVDHLVPQHIAIDIYKCYDKTQ PKPILNQR >Mature_168_residues MIAIYPGSFDPITLGHIDIIERGCNLFEKVIVAVLRNQSKTSLFTIEQRLNQICHSTKHLLNVEVASFDGLAVNYAKMQQ AKVLIRGLRVLSDFEKELQMAHTNKTLSPEIETVFLATSNEYSFLSSSVVKEIAVFGGSVDHLVPQHIAIDIYKCYDKTQ PKPILNQR
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family
Homologues:
Organism=Escherichia coli, GI1790065, Length=146, Percent_Identity=52.0547945205479, Blast_Score=165, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAD_TRIEI (Q115H2)
Other databases:
- EMBL: CP000393 - RefSeq: YP_721325.1 - ProteinModelPortal: Q115H2 - SMR: Q115H2 - STRING: Q115H2 - GeneID: 4242130 - GenomeReviews: CP000393_GR - KEGG: ter:Tery_1572 - NMPDR: fig|203124.1.peg.5675 - eggNOG: COG0669 - HOGENOM: HBG288308 - OMA: VRQIAAM - PhylomeDB: Q115H2 - BioCyc: TERY203124:TERY_1572-MONOMER - GO: GO:0005737 - HAMAP: MF_00151 - InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PRINTS: PR01020 - TIGRFAMs: TIGR01510 - TIGRFAMs: TIGR00125
Pfam domain/function: PF01467 CTP_transf_2
EC number: =2.7.7.3
Molecular weight: Translated: 18904; Mature: 18904
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAIYPGSFDPITLGHIDIIERGCNLFEKVIVAVLRNQSKTSLFTIEQRLNQICHSTKHL CEEECCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LNVEVASFDGLAVNYAKMQQAKVLIRGLRVLSDFEKELQMAHTNKTLSPEIETVFLATSN HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC EYSFLSSSVVKEIAVFGGSVDHLVPQHIAIDIYKCYDKTQPKPILNQR CHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIAIYPGSFDPITLGHIDIIERGCNLFEKVIVAVLRNQSKTSLFTIEQRLNQICHSTKHL CEEECCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LNVEVASFDGLAVNYAKMQQAKVLIRGLRVLSDFEKELQMAHTNKTLSPEIETVFLATSN HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECC EYSFLSSSVVKEIAVFGGSVDHLVPQHIAIDIYKCYDKTQPKPILNQR CHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA