| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475265
Identifier: 113475265
GI number: 113475265
Start: 2405638
End: 2406150
Strand: Direct
Name: 113475265
Synonym: Tery_1573
Alternate gene names: NA
Gene position: 2405638-2406150 (Clockwise)
Preceding gene: 113475264
Following gene: 113475275
Centisome position: 31.04
GC content: 37.82
Gene sequence:
>513_bases GTGGGGCGCACTTTAATAGATGAAGAACAGTTATTAGACCAACTAGATATTGTACGCCTGAATTTACCAGTTGCTTTTCA GGAAGCTGAAATGATTGTTCGCCATAAAGATGATATATTTCAAGAAGCTGAACTTTACGCTGAAGAAATTATTGAAAATG CAGAACAACGAGCTTCTCAAATCTTAAATGAAATGGGCCTTGTACAGCAGGCTAAATTAGAAGCAGATCAACTTAGAAAC CAAGTTCAGCTAGACTGTGAAGCAATTCAACAAGCTACTATCACTGAAATTGAACAAATTCGTTATCAAGCTCAACAAGA ACTTGAAGAAATGAGAGCTAGAGCGATCGCCGAGTGTGATGAAATTCAGAATGGAGCTGATGACTATGCTGACCATGTAC TTGATAGTATTGAACAGCAGTTAACAAATATGCTGCAAGTTATTCGTAATGGCCGTCAACAACTAGGAGGAGATGGAACT TTAGGAACTCCCTTAAATCATACTAATGACTAA
Upstream 100 bases:
>100_bases TGTCGAGAGTCAACCTGCCAGTGGTTCCCCTGGAGTAGATATCCAGCGAGAACTGAATAGGCTGGAAGAGATTATTCTTG ATAGTCCTAGAATACCTTTC
Downstream 100 bases:
>100_bases TAGCATAAGGATAACTTAGTTGACAATTTACAAGTTTTACAGTCCCCAATAACTCAGTTATTCTCAGTCAAATAAGTCAA AAATTAAATTTATTCACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRN QVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGT LGTPLNHTND
Sequences:
>Translated_170_residues MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRN QVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGT LGTPLNHTND >Mature_169_residues GRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRNQ VQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTL GTPLNHTND
Specific function: Unknown
COG id: COG3599
COG function: function code D; Cell division initiation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19402; Mature: 19271
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQ CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNEMGLVQQAKLEADQLRNQVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTLGTPLNHTND HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQ CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILNEMGLVQQAKLEADQLRNQVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTLGTPLNHTND HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA