Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113475265

Identifier: 113475265

GI number: 113475265

Start: 2405638

End: 2406150

Strand: Direct

Name: 113475265

Synonym: Tery_1573

Alternate gene names: NA

Gene position: 2405638-2406150 (Clockwise)

Preceding gene: 113475264

Following gene: 113475275

Centisome position: 31.04

GC content: 37.82

Gene sequence:

>513_bases
GTGGGGCGCACTTTAATAGATGAAGAACAGTTATTAGACCAACTAGATATTGTACGCCTGAATTTACCAGTTGCTTTTCA
GGAAGCTGAAATGATTGTTCGCCATAAAGATGATATATTTCAAGAAGCTGAACTTTACGCTGAAGAAATTATTGAAAATG
CAGAACAACGAGCTTCTCAAATCTTAAATGAAATGGGCCTTGTACAGCAGGCTAAATTAGAAGCAGATCAACTTAGAAAC
CAAGTTCAGCTAGACTGTGAAGCAATTCAACAAGCTACTATCACTGAAATTGAACAAATTCGTTATCAAGCTCAACAAGA
ACTTGAAGAAATGAGAGCTAGAGCGATCGCCGAGTGTGATGAAATTCAGAATGGAGCTGATGACTATGCTGACCATGTAC
TTGATAGTATTGAACAGCAGTTAACAAATATGCTGCAAGTTATTCGTAATGGCCGTCAACAACTAGGAGGAGATGGAACT
TTAGGAACTCCCTTAAATCATACTAATGACTAA

Upstream 100 bases:

>100_bases
TGTCGAGAGTCAACCTGCCAGTGGTTCCCCTGGAGTAGATATCCAGCGAGAACTGAATAGGCTGGAAGAGATTATTCTTG
ATAGTCCTAGAATACCTTTC

Downstream 100 bases:

>100_bases
TAGCATAAGGATAACTTAGTTGACAATTTACAAGTTTTACAGTCCCCAATAACTCAGTTATTCTCAGTCAAATAAGTCAA
AAATTAAATTTATTCACAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRN
QVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGT
LGTPLNHTND

Sequences:

>Translated_170_residues
MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRN
QVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGT
LGTPLNHTND
>Mature_169_residues
GRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQILNEMGLVQQAKLEADQLRNQ
VQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECDEIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTL
GTPLNHTND

Specific function: Unknown

COG id: COG3599

COG function: function code D; Cell division initiation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19402; Mature: 19271

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQ
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNEMGLVQQAKLEADQLRNQVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTLGTPLNHTND
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GRTLIDEEQLLDQLDIVRLNLPVAFQEAEMIVRHKDDIFQEAELYAEEIIENAEQRASQ
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILNEMGLVQQAKLEADQLRNQVQLDCEAIQQATITEIEQIRYQAQQELEEMRARAIAECD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIQNGADDYADHVLDSIEQQLTNMLQVIRNGRQQLGGDGTLGTPLNHTND
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA