Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475222

Identifier: 113475222

GI number: 113475222

Start: 2317702

End: 2317824

Strand: Direct

Name: 113475222

Synonym: Tery_1528

Alternate gene names: NA

Gene position: 2317702-2317824 (Clockwise)

Preceding gene: 113475221

Following gene: 113475227

Centisome position: 29.91

GC content: 35.77

Gene sequence:

>123_bases
TTGCGTCAAAGAATTTCTCGGTTGGTCAGAAAGACTTTATCCTTTTCTAAAAAGCTTCGGTCCCATCTAGGAGATATTTG
GTATTTCATTAATCATTATAATGAAGCGATCGCTTCACTGTAA

Upstream 100 bases:

>100_bases
ATTTTGGGTCAGCTTACGAGCTTGTTTTTCCTGATTCAAGACATAAATCAGTGGGGAATATTCAGGTTGAACAGCTTATA
TAGAAAGATTAAATAATACT

Downstream 100 bases:

>100_bases
TTTTATCACTACATATACAGGACCACCAGATTTTTTTATCATCTCCTTCTGCTATTGTCTGAAATTTTATTCGTCTTGAT
ATTGGTTGAAAATAATGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL

Sequences:

>Translated_40_residues
MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL
>Mature_40_residues
MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4850; Mature: 4850

Theoretical pI: Translated: 11.56; Mature: 11.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQRISRLVRKTLSFSKKLRSHLGDIWYFINHYNEAIASL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA